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2024-09-25DEBUG: Log out R/qtl2 or Pair-Scan resultsFrederick Muriuki Muriithi
Running R/qtl2 and Pair-Scan results in the production container fails, but somehow runs on production. This implies a possible configuration thing that is not explicit. Hopefully this debug helps surface the cause to enable fixing.
2024-09-11BugFix: Avoid string interpolation for building URLsFrederick Muriuki Muriithi
The string interpolation previously used was leading to a URL of the form `http://localhost:9080api/rqtl/compute` rather than `http://localhost:9080/api/rqtl/compute`.
2024-09-10Add debug logging for GEMMA mapping commandsFrederick Muriuki Muriithi
2024-08-19Edit Haplotype Analyst legend contentzsloan
- Change order from Pat/Mat to Mat/Pat - Increase width of example color bars - Change 'Unk' to 'Unknown' and shift everything to the left so it fits
2024-08-19Change 'Sequence Site' text to 'Gene Location'zsloan
2024-08-19Only draw position marker if position existszsloan
Previous it was drawing the marker at the end of the map even when mapping with traits that don't have a position (like Publish/phenotype traits)
2024-04-22Change haplotype analyst color schemezsloan
2024-03-21Fix issue where Haplotype band could overlap with Homology band (plus other ↵zsloan
spacing issues related to the Homology band) Change Homology track colors to be more color-blind friendly
2024-03-21Give more space for strain names in haplotype bandzsloan
2024-01-08Fix issue where mapmodel_rqtl and mapmethod_rqtl were still named ↵zsloan
mapmodel_rqtl_geno and mapmethod_rqtl_geno respectively
2023-12-29Namespace all modules under gn2.Arun Isaac
We move all modules under a gn2 directory. This is important for "correct" packaging and deployment as a Guix service.