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2021-11-17README.org: Replace broken link with environments pageBonfaceKilz
2021-10-26Remove unnecessary git pull commands from installation instructionsjgart
2021-08-24README: on installing GN2Pjotr Prins
2021-08-24README: install with guix profilePjotr Prins
2020-08-20Replace all references to python2.7 with python3.8BonfaceKilz
Run: ``` find . -type f -print0 | xargs -0 sed -i \ "s|lib/python2.7/site-packages|lib/python3.8/site-packages|g" ```
2020-07-25Updating docs and show how to include a local Python modulePjotr Prins
2020-04-30Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing.3Pjotr Prins
2020-04-30GN2 install checklistPjotr Prins
2020-04-28Redis settingPjotr Prins
2020-04-23DocsPjotr Prins
2020-04-20Remove ElasticPjotr Prins
2020-04-20Text search commentPjotr Prins
2020-04-20MariadbPjotr Prins
2019-02-18Updated installation instructions and SERVER_PORT for single flask serverPjotr Prins
2018-10-15Added "as root" for instructions on running ESzsloan
Forgot to add to change user to root during the last commit
2018-10-15Updated instructions for running elasticsearchzsloan
Since I know I'll forget otherwise, updated instructions on starting up ES
2018-08-23Added "change user to elasticsearch"zsloan
Added "change user to elasticsearch" to the description of how to start elasticsearch
2018-08-10Added the command needed to start up elasticsearchzsloan
I added the command to start elasticsearch, since I've had to look it up/ask Pjotr about it a couple times now.
2017-12-20Bring in some earlier work - mostly documentation and startup handlingPjotr Prins
2017-05-21Merge from the diet branch.Pjotr Prins
* refactored ./bin/genenetwork2 and /etc/default_settings - better detection of Guix - removed unused parameters, such as GEMMA_RESULT_PATH and TEMP_TRAITS - removing some default settings, such as PYLMM_COMMAND - rename some settings, such as SQL_URI and LOG_SQL_ALCHEMY - added GUIX_JS_PATH for JS modules * Added documentation on installing binary GN2 * Updated Twitter board to latest version in Guix - it had broken * Updated many tools in the latest Guix profile
2016-11-08READMEPjotr Prins
2016-11-03Updated to use gn-deployPjotr Prins
2016-11-02Fixing docsPjotr Prins
2016-09-25Doc: Section on reproducibilityPjotr Prins
- fixed SVG URLs
2016-09-10Doc: Rpy2 notePjotr Prins
2016-09-09Doc: note on guix pathsPjotr Prins
2016-06-15Menu: populating tissue from RESTPjotr Prins
2016-06-14Adding documentationPjotr Prins
2016-06-10Docs: the caching server got fixed by http://bugs.gnu.org/21888Pjotr Prins
2016-06-09Doc: moved graph to a lower sectionPjotr Prins
2016-06-09Doc: moved graph into READMEPjotr Prins
2016-06-09Doc: moved graph into READMEPjotr Prins
2016-06-09Doc: moved graph into READMEPjotr Prins
2016-06-09Docs: add SVG graphPjotr Prins
2016-06-09Merge branch 'paper' of github.com:pjotrp/genenetwork2 into paperPjotr Prins
2016-06-09Docs: expanding on GN2 source install and moved IRC log to the bottomPjotr Prins
2016-06-08Fix a typoDennis E. Mungai
Fixed: Before, substituted.
2016-06-08Docs: updated installation recipePjotr Prins
2016-06-08Docs: updated installation recipePjotr Prins
2016-06-08Docs: updated installation recipePjotr Prins
2016-06-08Docs: added installation recipePjotr Prins
2016-05-17Update URLPjotr Prins
2016-05-13README: nginx configuration as reverse proxyPjotr Prins
2016-05-13Added IRC logPjotr Prins
2016-05-13Added IRC logPjotr Prins
2016-05-11README: nginxPjotr Prins
2016-04-29README: on missing modulesPjotr Prins
2016-04-28READMEPjotr Prins
2016-04-26README: add environment paths infoPjotr Prins
2016-04-20A few fixes to get the webserver running againPjotr Prins
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