| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2024-09-13 | Use urlencode for query strings. | Alexander_Kabui | |
| 2024-09-13 | Update data if new changes are made. | Alexander_Kabui | |
| 2024-09-13 | refactor: urlencode query string. | Alexander_Kabui | |
| 2024-09-13 | Merge pull request #868 from genenetwork/feature/xapian-to-llm-text-transformer | Alexander Kabui | |
| feat: implement text transformer for xapian searches. | |||
| 2024-09-13 | Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into ↵ | Alexander_Kabui | |
| feature/xapian-to-llm-text-transformer | |||
| 2024-09-13 | Move the clean xapian query function to gn2 helper functions. | Alexander_Kabui | |
| 2024-09-13 | Use if statement for clarity. | Alexander_Kabui | |
| 2024-09-12 | Add a generic gn_docs template. | Alexander_Kabui | |
| 2024-09-12 | Use generic template for similar templates. | Alexander_Kabui | |
| 2024-09-12 | Autopep8 fixes. | Alexander_Kabui | |
| 2024-09-12 | Render markdown from genenenetwork:gn-docs. | Alexander_Kabui | |
| 2024-09-12 | Add util functions for fetching and rendering markdown as html. | Alexander_Kabui | |
| 2024-09-12 | Minor typo fix. | Alexander_Kabui | |
| 2024-09-12 | Fetch markdown for rendering form gn-docs. | Alexander_Kabui | |
| 2024-09-12 | Integrate gn editor for files. | Alexander_Kabui | |
| 2024-09-12 | fix: stop extending gnqa_answer.html | John Nduli | |
| gnqa_answer.html is used by htmx to return a post result. I revert my change and include this in `gnqa.html` instead, to load results from a GET request. | |||
| 2024-09-12 | feat: add rough implementation for xapian query cleaner | John Nduli | |
| 2024-09-12 | fix: change request for search to get | John Nduli | |
| 2024-09-12 | fix: gnqa_answer but fix for missing html | John Nduli | |
| 2024-09-12 | feat: implement text transformer for xapian searches. | Alexander_Kabui | |
| 2024-09-12 | refactor: Use get for all request to gn3 search endpoint. | Alexander_Kabui | |
| 2024-09-12 | refactor: render gnqa homepage if no query for get request. | Alexander_Kabui | |
| 2024-09-12 | Fix: minor typo fix. | Alexander_Kabui | |
| 2024-09-11 | JOSS logo is defunct | Frederick Muriuki Muriithi | |
| Taken from commit https://github.com/genenetwork/genenetwork2/commit/20256ebae8c10fe9caae4599d1678936581e8f8e by Pjotr Prins. I did not want to deal with the merge conflicts that have arisen due to the differences in time since the original commit was made and when I finally got to merging it. It was just easier to copy the change. | |||
| 2024-09-11 | Introduce recent D3 | Pjotr Prins | |
| 2024-09-11 | Bump D3 to version 7 for pair scan | Pjotr Prins | |
| 2024-09-11 | Fix d3panels load path to use Guix | Pjotr Prins | |
| 2024-09-11 | Remove JS d3panels package - we are moving that to guix-bioinformatics | Pjotr Prins | |
| 2024-09-11 | Avoid loading fontawesome twice (it is in base) and change button class for ↵ | Pjotr Prins | |
| purescript browser | |||
| 2024-09-11 | Bump version | Pjotr Prins | |
| 2024-09-11 | feat: async js loading for fahamu results | John Nduli | |
| 2024-09-11 | feat: ai_search result loaded by javascript | John Nduli | |
| 2024-09-11 | feat: ai search uses accordion to fold_out | John Nduli | |
| 2024-09-11 | refactor: align search llm tooltip to be vertical | John Nduli | |
| 2024-09-11 | fix: add flag that enables/disables search UI | John Nduli | |
| 2024-09-11 | feat: add ai search box to xapian results page | John Nduli | |
| 2024-09-11 | BugFix: Avoid string interpolation for building URLs | Frederick Muriuki Muriithi | |
| The string interpolation previously used was leading to a URL of the form `http://localhost:9080api/rqtl/compute` rather than `http://localhost:9080/api/rqtl/compute`. | |||
| 2024-09-11 | BUGFIX: Use absolute paths for font files | Frederick Muriuki Muriithi | |
| Use absolute paths for font files so that they are loaded successfully, regardless of whether the application is run with the working directory being the root of the GN2 repo/package or not. | |||
| 2024-09-11 | Log out the absolute path | Frederick Muriuki Muriithi | |
| Log out the absolute path to avoid replicating the relative path in the logs, which isn't useful. This relates to commit ca8018a61f2e014b4aee4da2cbd00d7b591b2f6a | |||
| 2024-09-11 | Debug Haley-Knott Regression mapping failure | Frederick Muriuki Muriithi | |
| I suspect the use of relative paths might be the cause of the failure in the production container — In the development environments and the CI/CD container, the applications are run at the root of the GN2 repository/package. This might not be the case in the production-esque containers, since the packages are installed in GNU Guix's store, and the launching of the application might be entirely elsewhere. This commit will hopefully log out the information necessary to figure out whether or not my hypothesis is correct. | |||
| 2024-09-11 | Fixup Use white-space pre-line to show newlines for answer. | Alexander_Kabui | |
| 2024-09-10 | Merge changes | Alexander_Kabui | |
| 2024-09-10 | Implement client side pagination for history page. | Alexander_Kabui | |
| 2024-09-10 | Minor pydint fixes. | Alexander_Kabui | |
| 2024-09-10 | Add debug logging for GEMMA mapping commands | Frederick Muriuki Muriithi | |
| 2024-09-10 | Use white-space pre-line to show newlines for answer. | Alexander_Kabui | |
| 2024-09-06 | Fail noisily to help with troubleshooting issues. | Frederick Muriuki Muriithi | |
| 2024-09-06 | Use query string for Gnqa Search endpoint. | Alexander_Kabui | |
| 2024-09-06 | Remove dead Api endpoints for gnqa. | Alexander_Kabui | |
| 2024-09-06 | Use application level Exception Handler for Unknown exceptions. | Alexander_Kabui | |
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index : genenetwork2 | |
| GeneNetwork (2nd generation) |
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