Age | Commit message (Expand) | Author |
---|---|---|
2020-11-04 | Changed numeric-html sorting for the Tissue/Lit r columns to natural-minus-na......* wqflask/wqflask/templates/correlation_page.html - Replaced numeric-html sorting with natural-minus-na for the lit/tissue r columns | zsloan |
2020-11-04 | Use new glossary link from glossary_blueprint in html templates | BonfaceKilz |
2020-11-04 | Add missing image | BonfaceKilz |
2020-11-04 | Add link markers to elements which are referenced from elsewhere | BonfaceKilz |
2020-11-04 | Update test_markdown_routes...* wqflask/tests/unit/wqflask/test_markdown_routes.py (test_render_markdown_when_fetching_locally): Fix failing test. | BonfaceKilz |
2020-11-04 | Add an edit link button to glossary page | BonfaceKilz |
2020-11-04 | Wrap rendered content in div container | BonfaceKilz |
2020-11-04 | Update glossary markdown file | BonfaceKilz |
2020-11-04 | Merge pull request #475 from Alexanderlacuna/test-showtrait...Add more tests for show trait module | BonfaceKilz |
2020-11-04 | correct a typo | Alexanderlacuna |
2020-11-04 | remove extra whitespace | Alexanderlacuna |
2020-11-04 | remove whitespace in line 119-120 | Alexanderlacuna |
2020-11-04 | remove whitespace | Alexanderlacuna |
2020-11-04 | remove whitespace and assertIs | Alexanderlacuna |
2020-11-04 | Use python3-genenetwork2 docker image on commit 0bf4ee6 | BonfaceKilz |
2020-11-03 | Merge pull request #479 from zsloan/bug/haplotype_analyst_error_fix...Bug/haplotype analyst error fix | zsloan |
2020-11-03 | Changed the syntax for the "sort" function in the docstring of GeneralObject ......* wqflask/base/GeneralObject.py - edited docstring to be correct for Python 3 | zsloan |
2020-11-03 | Fixed a sort used when doing the haplotype analysis to be compatible with Pyt......* wqflask/wqflask/marker_regression/display_mapping_results.py - The arguments for sort are different in Python 3, so it was changed to be compatible | zsloan |
2020-11-03 | Fix false-positive tests...* wqflask/tests/unit/wqflask/test_markdown_routes.py: (MockRequests404): Pass self in all properties. (MockRequests200): Ditto. (test_render_markdown): Rename to test_render_markdown_when_fetching_locally. (test_render_markdown_when_fetching_remotely): New test. | BonfaceKilz |
2020-11-03 | Merge pull request #478 from zsloan/loading_page_n_fix...Joined sample names in primary_samples and all_samples with commas be… | zsloan |
2020-11-03 | Joined sample names in primary_samples and all_samples with commas because th......* wqflask/wqflask/show_trait/show_trait.py primary_samples and all_samples passed as hidden form inputs now have names split by commas so they can be counted correctly when displaying the N on the mapping loading screen | zsloan |
2020-11-03 | Delete file...* wqflask/tests/integration/test_glossary.py: Delete it. Earlier renamed to test_markdown_routes. | BonfaceKilz |
2020-11-03 | Add basic tests for rendering_markdown...* wqflask/tests/unit/wqflask/test_markdown_routes.py: New tests. | BonfaceKilz |
2020-11-03 | Add basic structure for "/glossary" routes test | BonfaceKilz |
2020-11-03 | Update issue and PR templates...* .github/ISSUE_TEMPLATE/bug_report.md: Provide explanations in commented out blocks. * .github/ISSUE_TEMPLATE/feature_request.md: Ditto. * .github/PULL_REQUEST_TEMPLATE.md: Ditto. * .github/ISSUE_TEMPLATE/user_story.md: Ditto. | BonfaceKilz |
2020-11-03 | Move logic for fetching md files to it's own function...* wqflask/wqflask/markdown_routes.py (render_markdown): New function. (glossary): use render_markdown function. | BonfaceKilz |
2020-11-03 | Use python3-genenetwork2 on commit bdce85d in container...* .github/workflows/main.yml: Update gn2 container. | BonfaceKilz |
2020-11-03 | Add simple md content in glossary.md | BonfaceKilz |
2020-11-03 | Update glossary template with markdown content | BonfaceKilz |
2020-11-03 | Rename glossary.py to markdown_routes.py...Evary page with markdown content will have routes added in markdown_routes.py * markdown_routes.py: New file. * wqflask/wqflask/glossary.py: Delete it. * wqflask/wqflask/__init__.py: Update import. | BonfaceKilz |
2020-11-03 | Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into te... | Alexanderlacuna |
2020-11-03 | remove unnecessary comments | Alexanderlacuna |
2020-11-03 | add pep8 formatting | Alexanderlacuna |
2020-11-03 | add tests for the get_categorical_variables function | Alexanderlacuna |
2020-11-03 | Remove encoding header for file...In python3 the default encoding is utf-8 so this is redundant. | BonfaceKilz |
2020-11-03 | Separate unittests from integration tests | BonfaceKilz |
2020-11-03 | Add test for "/glossary" route | BonfaceKilz |
2020-11-03 | Add glossary template and use it | BonfaceKilz |
2020-11-03 | Add and register glossary blueprint | BonfaceKilz |
2020-11-03 | Apply PEP-8 to file...* wqflask/wqflask/__init__.py: Remove unused import and variables. Also add module docstring and pylint errors to ignore. (before_request): Use correct spacing. | BonfaceKilz |
2020-11-03 | switch from assertFalse to assertIs | Alexanderlacuna |
2020-11-03 | Remove stale file...* jquery.qtip.css: Delete it. | BonfaceKilz |
2020-11-03 | switch from assertTrue/False to assertIs to make the tests tighter | Alexanderlacuna |
2020-11-03 | use assertTrue and assertFalse in while testing boolean | Alexanderlacuna |
2020-11-02 | Merge pull request #476 from zsloan/correlation_errors_fix...Correlation errors fix | zsloan |
2020-11-02 | Created function for encoding the column value as bytes when fetching from th......* wqflask/utility/redis_tools.py - Created function load_json_from_redis that encodes the key (column_value) when fetching a value from the JSON pulled from Redis | zsloan |
2020-11-02 | Changed correlation page logic to skip over traits that share fewer than 6 sa......* wqflask/wqflask/correlation/show_corr_results.py - Moved the num_overlap check so that it never attempts to calculate the correlation if it's too low + checked if trait_object is None in the main loop (since it would be returned as None if the user doesn't have permissions | zsloan |
2020-11-02 | add better formatting | Alexanderlacuna |
2020-11-02 | add function docstring | Alexanderlacuna |
2020-11-02 | add tests for show trait module | Alexanderlacuna |