| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2015-05-26 | Merge pull request #58 from lomereiter/pp | zsloan | |
| Use NVD3 for bar chart and probability plot | |||
| 2015-05-26 | fix terminology | Artem Tarasov | |
| 2015-05-26 | use NVD3 for bar charts | Artem Tarasov | |
| added informative tooltips and error bars | |||
| 2015-05-23 | pp group selection | Artem Tarasov | |
| 2015-05-23 | fix group selection in blocking by index | Artem Tarasov | |
| 2015-05-23 | Fix trait grouping | Artem Tarasov | |
| 2015-05-23 | new probability plot (using NVD3 library) | Artem Tarasov | |
| * z scores are computed on the client side (using jStat library) * added Shapiro-Wilk test results | |||
| 2015-05-22 | Fixed issue where correlation didn't work for human traits (and probably ↵ | zsloan | |
| some others) | |||
| 2015-05-21 | Changed the digits for additive effect and megabases in the search results table | zsloan | |
| 2015-05-20 | Merge pull request #53 from lomereiter/bar_chart_improvements | zsloan | |
| Bar chart improvements | |||
| 2015-05-20 | revert database.py setup | Artem Tarasov | |
| 2015-05-20 | bar charts polished | Artem Tarasov | |
| * fixed bar chart width (two bars were invisible) * disabled basic stats update effects, if they are not visible * fix: unchecked samples were shown in charts (because attr('checked') was used instead of prop('checked')) * bar chart gets redrawn after checkbox changes * edit_data_change is also called when clicking buttons from the 'Block samples' panel * better bar chart transitions (use sample name as d3 key function) | |||
| 2015-05-19 | Fixed an issue causing position search to not work in a combined search. | zsloan | |
| 2015-05-19 | Fixed an issue that caused combined search to not work | zsloan | |
| 2015-05-20 | improved legend | Artem Tarasov | |
| Now the legend is always positioned on top, so that no overlapping with the plot occurs and it's always visible. The legend is now composed of spans, not an SVG anymore. Also increased the legend font size to 20px. | |||
| 2015-05-19 | Regular LRS searches and p-value searches now work. | zsloan | |
| 2015-05-18 | Merge pull request #51 from lomereiter/upstream | zsloan | |
| fix broken trait page | |||
| 2015-05-18 | fix attribute coloring | Artem Tarasov | |
| also I found out that there are two legends shown simultaneously, but one is suitable only for discrete values, and the other for continuous; now only the suitable one is shown | |||
| 2015-05-18 | Merge branch 'upstream' of github.com:lomereiter/genenetwork2 into issue28 | Artem Tarasov | |
| 2015-05-18 | fix broken trait page | Artem Tarasov | |
| 2015-05-15 | Merge branch 'master' of github.com:genenetwork/genenetwork2 | zsloan | |
| 2015-05-15 | Position search now works for mRNA assay and genotype data sets | zsloan | |
| 2015-05-15 | Merge pull request #49 from lomereiter/case_attributes | zsloan | |
| Reduce number of queries for getting case attributes | |||
| 2015-05-15 | reduce number of queries | Artem Tarasov | |
| 2015-05-15 | wip | Artem Tarasov | |
| 2015-05-13 | Fixed issue where you could change the Make Default button's text | zsloan | |
| 2015-05-13 | Fixed sorting on the trait page so that x values always appear at the bottom | zsloan | |
| 2015-05-13 | Improved sorting for columns with N/A or missing values | zsloan | |
| 2015-05-13 | Merge pull request #39 from pjotrp/master | zsloan | |
| Refactoring finding tools such as pylmm | |||
| 2015-05-13 | Merge pull request #40 from lomereiter/trait_page_queries | zsloan | |
| Speedup trait page generation | |||
| 2015-05-13 | comment out sql query logging | Artem Tarasov | |
| 2015-05-13 | combine three similar queries into one | Artem Tarasov | |
| 2015-05-13 | replace multiple tissue queries with a single one | Artem Tarasov | |
| 2015-05-13 | cache datasets for each group | Artem Tarasov | |
| 2015-05-12 | Updated pylmm path in INSTALL doc | pjotrp | |
| 2015-05-12 | Merge branch 'master' of github.com:pjotrp/genenetwork2 | pjotrp | |
| 2015-05-12 | Add info to warning | pjotrp | |
| 2015-05-12 | Merge branch 'master' of github.com:genenetwork/genenetwork2 | zsloan | |
| 2015-05-12 | Remove app line | pjotrp | |
| 2015-05-12 | More elaborate handling of finding pylmm | Pjotr Prins | |
| 2015-05-12 | Move path search into tools.py | pjotrp | |
| 2015-05-12 | Merge branch 'master' of https://github.com/zsloan/genenetwork2 | pjotrp | |
| 2015-05-12 | Merge branch 'master' of github.com:genenetwork/genenetwork2 | pjotrp | |
| 2015-05-12 | Added pylmm instruction | pjotrp | |
| 2015-05-12 | Resolved conflict before commit | zsloan | |
| 2015-05-12 | Merge branch 'master' of github.com:genenetwork/genenetwork2 | zsloan | |
| 2015-05-12 | Just removed some code that wasn't being used | zsloan | |
| 2015-05-12 | Merge pull request #20 from lomereiter/issue11 | zsloan | |
| Fixes #11 (buttons on collection page) | |||
| 2015-05-12 | Merge pull request #23 from pjotrp/master | zsloan | |
| Removing pylmm out of the GN2 tree | |||
| 2015-05-12 | Fix #35 | Artem Tarasov | |
| * 'aliases' and 'location' are shown only where relevant * descriptions for phenotype datasets are provided at the top | |||
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index : genenetwork2 | |
| GeneNetwork (2nd generation) |
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