aboutsummaryrefslogtreecommitdiff
AgeCommit message (Collapse)Author
2024-09-17Handle Effect Size plots on the scatterplot pagezsloan
Added a new parameter to the scatterplot page ('effect') that causes the figures to be drawn differently. For example: - The plot width is different - Spearman Rank plot isn't displayed/generated - The number of X-axis ticks is explicitly set to 3, with no decimal places
2024-09-17Explicitly set width for scatterplot div so the X/Y-axis description text ↵zsloan
doesn't extend beyond the width of the plot itself
2024-09-17refactor: improve do_ai_searchJohn Nduli
2024-09-17Merge pull request #873 from genenetwork/chores/editor-ui-refactoringAlexander Kabui
Refactor: Gn editor code refactoring.
2024-09-17Refactor: remove hardcoded links and fix bug for path.Alexander_Kabui
2024-09-17Replace underscore with hyphen for gn docs url prefix.Alexander_Kabui
2024-09-17Refactor: Fix word for editor UI e.g commit to Save.Alexander_Kabui
2024-09-17fix: ui redesign with history button and ignore default web_url valueJohn Nduli
2024-09-17feat: hide edit button if user isnt logged inJohn Nduli
2024-09-17feat: show edit button in view rif pageJohn Nduli
2024-09-17feat: prefill email in edit rifJohn Nduli
2024-09-17fix: dynamically get the keys that may contain error messagesJohn Nduli
2024-09-17docs: add missing keys to default_settings for gn_auth to workJohn Nduli
2024-09-16Merge pull request #871 from jnduli/default_message_llm_searchAlexander Kabui
feat: show log in message for search results
2024-09-16feat: show log in message for search resultsJohn Nduli
2024-09-16Merge pull request #870 from genenetwork/chores/gn-editor-ui-cleanupAlexander Kabui
Refactor: refactor url_for for gn docs.
2024-09-16Refactor: refactor url_for for gn docs.Alexander_Kabui
2024-09-16Merge pull request #869 from genenetwork/features/Integrate-editing-doc-filesAlexander Kabui
Integrate gn editor for files.
2024-09-16Refactor: run dlint on html files.Alexander_Kabui
2024-09-16fix: fix url for gn-docs glossary.Alexander_Kabui
2024-09-13Use gn_docs blueprint for doc files.Alexander_Kabui
2024-09-13Define new blueprint for all gn_docs.Alexander_Kabui
2024-09-13Use urlencode for query strings.Alexander_Kabui
2024-09-13Update data if new changes are made.Alexander_Kabui
2024-09-13refactor: urlencode query string.Alexander_Kabui
2024-09-13Merge pull request #868 from genenetwork/feature/xapian-to-llm-text-transformerAlexander Kabui
feat: implement text transformer for xapian searches.
2024-09-13Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into ↵Alexander_Kabui
feature/xapian-to-llm-text-transformer
2024-09-13Move the clean xapian query function to gn2 helper functions.Alexander_Kabui
2024-09-13Use if statement for clarity.Alexander_Kabui
2024-09-12Add a generic gn_docs template.Alexander_Kabui
2024-09-12Use generic template for similar templates.Alexander_Kabui
2024-09-12Autopep8 fixes.Alexander_Kabui
2024-09-12Render markdown from genenenetwork:gn-docs.Alexander_Kabui
2024-09-12Add util functions for fetching and rendering markdown as html.Alexander_Kabui
2024-09-12Minor typo fix.Alexander_Kabui
2024-09-12Fetch markdown for rendering form gn-docs.Alexander_Kabui
2024-09-12Integrate gn editor for files.Alexander_Kabui
2024-09-12fix: stop extending gnqa_answer.htmlJohn Nduli
gnqa_answer.html is used by htmx to return a post result. I revert my change and include this in `gnqa.html` instead, to load results from a GET request.
2024-09-12feat: add rough implementation for xapian query cleanerJohn Nduli
2024-09-12fix: change request for search to getJohn Nduli
2024-09-12fix: gnqa_answer but fix for missing htmlJohn Nduli
2024-09-12feat: implement text transformer for xapian searches.Alexander_Kabui
2024-09-12refactor: Use get for all request to gn3 search endpoint.Alexander_Kabui
2024-09-12refactor: render gnqa homepage if no query for get request.Alexander_Kabui
2024-09-12Fix: minor typo fix.Alexander_Kabui
2024-09-11JOSS logo is defunctFrederick Muriuki Muriithi
Taken from commit https://github.com/genenetwork/genenetwork2/commit/20256ebae8c10fe9caae4599d1678936581e8f8e by Pjotr Prins. I did not want to deal with the merge conflicts that have arisen due to the differences in time since the original commit was made and when I finally got to merging it. It was just easier to copy the change.
2024-09-11Introduce recent D3Pjotr Prins
2024-09-11Bump D3 to version 7 for pair scanPjotr Prins
2024-09-11Fix d3panels load path to use GuixPjotr Prins
2024-09-11Remove JS d3panels package - we are moving that to guix-bioinformaticsPjotr Prins