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2021-11-18Updating tutorials by AC 11-18-21Arthur Centeno
2021-11-18Updating tutorials by AC on 11-18-21Arthur Centeno
2021-11-18Merge github.com:genenetwork/genenetwork2 into current_productionArthur Centeno
2021-11-18AC Updating base, index_page and tutorials on 11-18-21Arthur Centeno
2021-11-18refactor code for metadataAlexander Kabui
2021-11-18remove unused functions rename function namesAlexander Kabui
2021-11-18pep8 formatting;minor fixesAlexander Kabui
2021-11-17Changed the URL for editing trait metadata to use the dataset group ID ↵zsloan
instead of the PublishFreezeId
2021-11-17Fix issue where gene global search throws an error due to some traits not ↵zsloan
having a gene symbol (not sure why they don't in the DB, but the code defaults it to N/A now)
2021-11-17Merge pull request #634 from zsloan/bug/fix_gene_gsearchzsloan
Fix gene global search
2021-11-17Fixes gene global search error caused by some genes not having a symbol (not ↵zsloan
sure why this is in the DB; seems to have only happened recently)
2021-11-17add generic functio for generating filenameAlexander Kabui
2021-11-17refactor sql query & date formattingAlexander Kabui
2021-11-17README.org: Replace broken link with environments pageBonfaceKilz
2021-11-17Moven GN API doc to gn-docs repoPjotr Prins
2021-11-17update live jupyter notebooksjgart
2021-11-17update jupyter notebook link namejgart
This does not point to the launcher app but to the curated notebooks.
2021-11-17pep8 formatting;delete remove redis dependencyAlexander Kabui
2021-11-17isolate function to cache new traits metadataAlexander Kabui
2021-11-17isolate function to fetch the traits metadataAlexander Kabui
2021-11-17replace redis fetch for cached timestamp with a queryAlexander Kabui
2021-11-17isolate SQL_URI parse to a functionAlexander Kabui
2021-11-17use a dynamic value for the db_nameAlexander Kabui
2021-11-16Merge pull request #632 from Alexanderlacuna/tempfix/disable_cachingzsloan
Tempfix for reading from cache
2021-11-17temp disable traits metadata cacheAlexander Kabui
2021-11-17temp disable query cachingAlexander Kabui
2021-11-16use comprehension list;fix typoAlexander Kabui
2021-11-16pep8 formatting remove debug statementsAlexander Kabui
2021-11-16init disable fast compute:memory fork issuesAlexander Kabui
2021-11-16test generate new filesAlexander Kabui
2021-11-16refactor:fix on the query :modify cache pointAlexander Kabui
2021-11-15fetch only strains from the primary datasetsAlexander Kabui
2021-11-15test precomppute caching integrationAlexander Kabui
2021-11-15pep8 formatting & fix variable namesAlexander Kabui
2021-11-15refactor function to fetch datasets data for precomputesAlexander Kabui
2021-11-15fix for truncating filesAlexander Kabui
2021-11-12Merge pull request #627 from zsloan/bug/fix_gene_symbol_mapping_errorzsloan
Fix mapping export error when trait symbols is None
2021-11-12This change prevents an error caused by trying to export mapping results for ↵zsloan
a ProbeSet trait when there is no gene symbol
2021-11-12Merge pull request #626 from Alexanderlacuna/bugfix/nonetype-trait-symbol-fixAlexander Kabui
bugfix:cases where trait symbol is none
2021-11-12bugfix:cases where trait symbol is noneAlexander Kabui
2021-11-12Merge pull request #625 from zsloan/bug/too_many_results_search_errorzsloan
Bug/too many results search error
2021-11-12Change the max results to display depending upon data type, since ProbeSet ↵zsloan
results can be displayed in larger numbers more easily
2021-11-12Added check for too_many_results before writing the table JSzsloan
2021-11-11pep8 formatting + minor fixing for writing to filesAlexander Kabui
2021-11-11minor fix for updating dictAlexander Kabui
2021-11-11minor fix for generating file_nameAlexander Kabui
2021-11-11code to cache frequently run probeset correlationAlexander Kabui
2021-11-11fix issue with number for samplesAlexander Kabui
2021-11-11Update links for updating groupsBonfaceKilz
2021-11-11Add new group endpointsBonfaceKilz
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