| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2023-12-30 | setup.py: Use find_packages. | Arun Isaac | |
| 2023-12-30 | Namespace mock paths under gn2. | Arun Isaac | |
| 2023-12-29 | Correct path to etc/VERSION. | Arun Isaac | |
| 2023-12-29 | Remove only up to -c in bin/genenetwork2. | Arun Isaac | |
| For example, in bin/genenetwork2 etc/default_settings.py -c -m pytest, remove only up to -c. | |||
| 2023-12-29 | Namespace all modules under gn2. | Arun Isaac | |
| We move all modules under a gn2 directory. This is important for "correct" packaging and deployment as a Guix service. | |||
| 2023-12-29 | use gn-serverl-url for gn3 api | Alexander_Kabui | |
| 2023-12-23 | use gn3 local url | Alexander_Kabui | |
| 2023-12-22 | Merge pull request #823 from genenetwork/feature/gn-llm-ui | Alexander Kabui | |
| Feature/gn llm UI | |||
| 2023-12-22 | guix: Do not fix version of package. | Arun Isaac | |
| 2023-12-22 | guix: Clear up imports. | Arun Isaac | |
| 2023-12-21 | Add option to invert X and Y axes for scatterplot | zsloan | |
| 2023-12-21 | ui code refactoring | Alexander_Kabui | |
| 2023-12-20 | Add missing programmers + margins to credits page | zsloan | |
| 2023-12-20 | Add option to Show More/Less for trait page descriptions when the ↵ | zsloan | |
| description is more than 100 characters | |||
| 2023-12-20 | code refactoring | Alexander_Kabui | |
| 2023-12-20 | code formatting fixes | Alexander_Kabui | |
| 2023-12-20 | init gnqna ui implementation | Alexander_Kabui | |
| 2023-12-20 | add template handler for gngna | Alexander_Kabui | |
| 2023-12-20 | add gnqna search form for home page | Alexander_Kabui | |
| 2023-12-18 | Display empty collections | Frederick Muriuki Muriithi | |
| The count in the badge includes collections that are empty. This commit fixes the UI to display empty collections too. | |||
| 2023-12-18 | Fix typo. | Frederick Muriuki Muriithi | |
| 2023-12-15 | Increase width of Location selection for correlations | zsloan | |
| 2023-12-15 | Make correlation and mapping CSS for trait page the same | zsloan | |
| 2023-12-15 | Set min-width for show_trait page container div to prevent buttons from ↵ | zsloan | |
| looking weird with super narrow screens | |||
| 2023-12-15 | Update to more correct Xapian Search Queries link | zsloan | |
| 2023-12-13 | Update Global Search help link | zsloan | |
| 2023-12-07 | Move asterisk in mapping options to prevent overlapping with the Copy and ↵ | zsloan | |
| Share link | |||
| 2023-12-07 | Fix bug when viewing individual chromosomes for non-mouse/rat species | zsloan | |
| 2023-12-07 | Make the font-size for block-quotes smaller compared to the default. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-12-07 | Fix typo. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-12-07 | Add link to GN1 for quick comparison. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-12-07 | Update how the title is constructed. | Munyoki Kilyungi | |
| * wqflask/wqflask/templates/metadata/dataset.html: In order of priority, display: title, label, altLabel. Otherwise, you can possibly have the GN Accession Id forming the title of this page. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-12-07 | Update datasets page with updated RDF json-ld result. | Munyoki Kilyungi | |
| * wqflask/wqflask/templates/metadata/dataset.html: Minor updates. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-12-05 | Send the GN3 API server URI as configured for GN2 | Frederick Muriuki Muriithi | |
| 2023-12-05 | Update URIs to the new GN-AUTH uris | Frederick Muriuki Muriithi | |
| The javascript was still using the GN3 URIs from when auth was done in GN3. This commit updates the code to the new URI paths. | |||
| 2023-12-05 | Remove user-roles fetching statement | Frederick Muriuki Muriithi | |
| Remove the code fetching all the user roles, since they are not used. | |||
| 2023-11-30 | Remove duplicate month field in Phenotypes page. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-11-30 | Fix dataset page links in Phenotypes UI page. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-11-30 | Handle display for unpublished data | Munyoki Kilyungi | |
| Example: http://cd.genenetwork.org/phenotypes/BXD_17019 Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-11-30 | Add "Peak Location" in phenotypes display. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-11-30 | Refine display of publication details in phenotype template. | Munyoki Kilyungi | |
| * wqflask/wqflask/templates/phenotype.html: Use "metadata.references" to fetch publication details. Replace LRS value with LOD Score ("Peak -logP"). Rename "Additive" -> "Effect Size." Replace "Title" with "Publication." Use "ANSI/NISO Z39.29-2005(R2010)" format for displaying publications details. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-11-30 | Use correct field to fetch the additive value. | Munyoki Kilyungi | |
| * wqflask/wqflask/templates/phenotype.html: Use the correct field to fetch the additive value. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-11-30 | Remove text-underline for phenotype page-header. | Munyoki Kilyungi | |
| * wqflask/wqflask/templates/phenotype.html: Remove underline. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-11-30 | Update phenotype retrieval route, incorporate group parameter. | Munyoki Kilyungi | |
| * wqflask/wqflask/views.py (get_phenotype): Add "group" parameter. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-11-29 | Remove set operator when fetching correlation metadata | zsloan | |
| I'm not sure why this was introduced in the first place, but it appears to cause an issue where a semicolon is displayed in the description even when there's no probe target description (and removing it doesn't seem to cause any problems) | |||
| 2023-11-27 | Change info file links + make them open in new tabs | zsloan | |
| 2023-11-27 | Rename metadata/genotype -> metadata/genotypes. | Munyoki Kilyungi | |
| * wqflask/wqflask/views.py (get_genotype): Rename genotype -> genotypes. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-11-27 | Update genotype UI page. | Munyoki Kilyungi | |
| * wqflask/wqflask/templates/genotype.html: Update page. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-11-27 | Update the phenotype page. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2023-11-27 | Rename "/phenotype" -> "phenotypes" endpoint. | Munyoki Kilyungi | |
| * wqflask/wqflask/views.py (get_phenotype): Rename "/phenotype" -> "phenotypes". Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
 |
index : genenetwork2 | |
| GeneNetwork (2nd generation) |
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