| Age | Commit message (Expand) | Author |
|---|---|---|
| 2024-04-30 | Remove unused imports....* gn2/wqflask/edit.py: Delete subprocess, Paht, Either, Left, Right. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-04-30 | Delete __run__cmd__....* gn2/wqflask/edit.py (__run_cmd__): Delete. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-04-30 | Remove methods for fetching a dataset's metadata edit history....* gn2/wqflask/edit.py (__fetch_dataset_git_history__): Delete (view_history): Delete. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-04-30 | Delete function for saving metadata....* gn2/wqflask/edit.py (save_dataset_metadata): Delete. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-04-30 | Create a JWT to pass in secinfo to a GN3 editing endpoint....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-04-30 | Create constructors for encoding and decoding a token....* gn2/tests/unit/wqflask/oauth2/(__init__.py, test_tokens.py): Test cases for jwt token creation. * gn2/wqflask/oauth2/tokens.py (JWTToken): New module for creating jwt tokens. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-04-25 | Merge pull request #841 from genenetwork/feature/implement-new-qnqa-ui-template...Feature/implement new qnqa UI template | Alexander Kabui |
| 2024-04-24 | Bug: use dict object on Response object. | Frederick Muriuki Muriithi |
| 2024-04-24 | Fetch message for authlib errors. | Frederick Muriuki Muriithi |
| 2024-04-24 | Send assertion as a string, not bytes. | Frederick Muriuki Muriithi |
| 2024-04-24 | Provide a way to pass extra arguments to gunicorn | Frederick Muriuki Muriithi |
| 2024-04-24 | Use app's logger rather than root logger. | Frederick Muriuki Muriithi |
| 2024-04-24 | DEBUG: log out request details...There is a failure on CI/CD that is not obvious - the logs should help with debugging the issue. | Frederick Muriuki Muriithi |
| 2024-04-24 | Setup logging...Add logging to genenetwork2 | Frederick Muriuki Muriithi |
| 2024-04-23 | Create an endpoint for gnqa test template | Alexander_Kabui |
| 2024-04-23 | Add implementation for new gnqa template.... * This is a separate interface from gnqa main page for testing. | Alexander_Kabui |
| 2024-04-23 | Implementation for gnqa chatbox ui | Alexander_Kabui |
| 2024-04-23 | Add reimplementation for gnqa error page | Alexander_Kabui |
| 2024-04-23 | Don't fail startup due to missing config. | Frederick Muriuki Muriithi |
| 2024-04-23 | Separate the auth server's public key from app's private key...* Use the app's private key to sign the initial assertions used for retrieving an authorisation token from the auth server. * Use auth server's public key to validate the authorisation tokens got from the auth server. | Frederick Muriuki Muriithi |
| 2024-04-23 | Generate assertions to be used to get the token from the auth server | Frederick Muriuki Muriithi |
| 2024-04-23 | Client needs access to PRIVATE KEY, not PUBLIC KEY. | Frederick Muriuki Muriithi |
| 2024-04-23 | Use the JWT Bearer grant type | Frederick Muriuki Muriithi |
| 2024-04-23 | SSL_KEY_PAIR_PUBLIC_KEY: New setting...Define a new setting named SSL_KEY_PAIR_PUBLIC_KEY to hold the path to the SSL key-pair's public key, used with the JWTs. | Frederick Muriuki Muriithi |
| 2024-04-22 | Change haplotype analyst color scheme | zsloan |
| 2024-04-16 | Import missing symbol. | Frederick Muriuki Muriithi |
| 2024-04-11 | Merge pull request #838 from genenetwork/feature/refactor-gnqa-ui...Feature/refactor gnqa UI | Alexander Kabui |
| 2024-04-05 | Delete redundant UI codebase. | Alexander_Kabui |
| 2024-04-05 | Use bootstrap classes for ui. | Alexander_Kabui |
| 2024-04-05 | Refactor gnqa history endpoint.... * require gn-auth | Alexander_Kabui |
| 2024-04-05 | Add get history fetch url on gnqa homepage. | Alexander_Kabui |
| 2024-04-05 | Add gnqa history search page. | Alexander_Kabui |
| 2024-04-05 | Update UI for gnqa rating to use htmx. | Alexander_Kabui |
| 2024-04-05 | Update gnqa rating route. | Alexander_Kabui |
| 2024-04-03 | Add pubmed info and styling | Alexander_Kabui |
| 2024-04-02 | Display a history page containing all the edits....* gn2/wqflask/edit.py (__fetch_dataset_git_history__): New function. (view_history): New end-point. * gn2/wqflask/templates/dataset.html: Use htmx to fetch history. * gn2/wqflask/templates/dataset_history.html: New history page. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-04-02 | Use the dataset id to fetch the authorisation roles....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-04-02 | Load the edit page on the same page using HTMX....* gn2/wqflask/templates/dataset.html: Delete target="_blank" for the edit links. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-04-02 | Properly chain all the git and write operations together....* gn2/wqflask/edit.py (save_dataset_metadata): Chain running the git commands and the write operation together. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-04-02 | Refactor __run_cmd into private function __run_cmd__....* gn2/wqflask/edit.py: Import Right. Delete curry. (save_dataset_metadata)[__run_cmd]: Move this... (__run_cmd__): ... here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-04-02 | Add a "View History" link....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-03-27 | Add some styling to gnqa answer page....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> | Munyoki Kilyungi |
| 2024-03-27 | Fix htmx swap....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> | Munyoki Kilyungi |
| 2024-03-27 | Delete unused javascript in gnqa page....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> | Munyoki Kilyungi |
| 2024-03-27 | Add missing braces/brackets....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> | Munyoki Kilyungi |
| 2024-03-27 | Enable auto-complete in form....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> | Munyoki Kilyungi |
| 2024-03-27 | Clean up gnqa answer page....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> | Munyoki Kilyungi |
| 2024-03-27 | Delete unused template....* gn2/wqflask/templates/pubmed_modal.html: Delete. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> | Munyoki Kilyungi |
| 2024-03-27 | Delete llm.css and it's references....Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> | Munyoki Kilyungi |
| 2024-03-27 | Require ouath2 for gnqa history search....* gn2/wqflask/views.py (gnqna_hist): Add "require_oauth2" decorator. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> | Munyoki Kilyungi |
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