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2024-09-16Refactor: run dlint on html files.Alexander_Kabui
2024-09-16fix: fix url for gn-docs glossary.Alexander_Kabui
2024-09-13Use gn_docs blueprint for doc files.Alexander_Kabui
2024-09-13Define new blueprint for all gn_docs.Alexander_Kabui
2024-09-13Use urlencode for query strings.Alexander_Kabui
2024-09-13Update data if new changes are made.Alexander_Kabui
2024-09-13refactor: urlencode query string.Alexander_Kabui
2024-09-12Add a generic gn_docs template.Alexander_Kabui
2024-09-12Use generic template for similar templates.Alexander_Kabui
2024-09-12Autopep8 fixes.Alexander_Kabui
2024-09-12Render markdown from genenenetwork:gn-docs.Alexander_Kabui
2024-09-12Add util functions for fetching and rendering markdown as html.Alexander_Kabui
2024-09-12Minor typo fix.Alexander_Kabui
2024-09-12Fetch markdown for rendering form gn-docs.Alexander_Kabui
2024-09-12Integrate gn editor for files.Alexander_Kabui
2024-09-12refactor: Use get for all request to gn3 search endpoint.Alexander_Kabui
2024-09-12refactor: render gnqa homepage if no query for get request.Alexander_Kabui
2024-09-12Fix: minor typo fix.Alexander_Kabui
2024-09-11JOSS logo is defunctFrederick Muriuki Muriithi
Taken from commit https://github.com/genenetwork/genenetwork2/commit/20256ebae8c10fe9caae4599d1678936581e8f8e by Pjotr Prins. I did not want to deal with the merge conflicts that have arisen due to the differences in time since the original commit was made and when I finally got to merging it. It was just easier to copy the change.
2024-09-11Introduce recent D3Pjotr Prins
2024-09-11Bump D3 to version 7 for pair scanPjotr Prins
2024-09-11Fix d3panels load path to use GuixPjotr Prins
2024-09-11Remove JS d3panels package - we are moving that to guix-bioinformaticsPjotr Prins
2024-09-11Avoid loading fontawesome twice (it is in base) and change button class for ↵Pjotr Prins
purescript browser
2024-09-11Bump versionPjotr Prins
2024-09-11feat: async js loading for fahamu resultsJohn Nduli
2024-09-11feat: ai_search result loaded by javascriptJohn Nduli
2024-09-11feat: ai search uses accordion to fold_outJohn Nduli
2024-09-11refactor: align search llm tooltip to be verticalJohn Nduli
2024-09-11fix: add flag that enables/disables search UIJohn Nduli
2024-09-11feat: add ai search box to xapian results pageJohn Nduli
2024-09-11BugFix: Avoid string interpolation for building URLsFrederick Muriuki Muriithi
The string interpolation previously used was leading to a URL of the form `http://localhost:9080api/rqtl/compute` rather than `http://localhost:9080/api/rqtl/compute`.
2024-09-11BUGFIX: Use absolute paths for font filesFrederick Muriuki Muriithi
Use absolute paths for font files so that they are loaded successfully, regardless of whether the application is run with the working directory being the root of the GN2 repo/package or not.
2024-09-11Log out the absolute pathFrederick Muriuki Muriithi
Log out the absolute path to avoid replicating the relative path in the logs, which isn't useful. This relates to commit ca8018a61f2e014b4aee4da2cbd00d7b591b2f6a
2024-09-11Debug Haley-Knott Regression mapping failureFrederick Muriuki Muriithi
I suspect the use of relative paths might be the cause of the failure in the production container — In the development environments and the CI/CD container, the applications are run at the root of the GN2 repository/package. This might not be the case in the production-esque containers, since the packages are installed in GNU Guix's store, and the launching of the application might be entirely elsewhere. This commit will hopefully log out the information necessary to figure out whether or not my hypothesis is correct.
2024-09-11Fixup Use white-space pre-line to show newlines for answer.Alexander_Kabui
2024-09-10Merge changesAlexander_Kabui
2024-09-10Implement client side pagination for history page.Alexander_Kabui
2024-09-10Minor pydint fixes.Alexander_Kabui
2024-09-10Add debug logging for GEMMA mapping commandsFrederick Muriuki Muriithi
2024-09-10Use white-space pre-line to show newlines for answer.Alexander_Kabui
2024-09-06Fail noisily to help with troubleshooting issues.Frederick Muriuki Muriithi
2024-09-06Use query string for Gnqa Search endpoint.Alexander_Kabui
2024-09-06Remove dead Api endpoints for gnqa.Alexander_Kabui
2024-09-06Use application level Exception Handler for Unknown exceptions.Alexander_Kabui
2024-09-06Merge pull request #863 from genenetwork/chores/merge-gnqa-systemsAlexander Kabui
Chores/merge gnqa systems
2024-09-05Fix media query for medium to small size devices.Alexander_Kabui
2024-09-05Fetch updated records after deleting search history.Alexander_Kabui
2024-09-05Remove duplicate sections in wiki history page.Munyoki Kilyungi
* gn2/wqflask/templates/wiki/history.html: Use a for loop to remove duplicate section. * gn2/wqflask/views.py (display_wiki_history): Pass all the entries directly into the template. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-09-05Display rows even if they dont exist.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>