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genenetwork2
acenteno
authentication_test
blatseq_fix
chores/code-refactoring
chores/lmdb-integration
chores/replace-cdns
chores/script-textfile-generator
correlations-return-fewer-results
debug-too-many-connections-error
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development
epysode
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feature/textfile-generator
gn-master
guix-shell
hook-up-auth-to-traits-page
itp_covariate_testing
jupyter_notebooks_ui
lmdb-code/refactoring
master
notebooks_api
oauth2-migrate-user-details-and-data
partial-correlations
partial_corr_ui_rework
pcorrs_targets
penguin2
phewas
production
proxy-integration
refactor-configurations
refactor-data_set_py-20220920
revert-366-360_update_htmlgen
rework-genotype-linking
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stable
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Author
2024-08-05
Update JWKs endpoint documentation.
Frederick Muriuki Muriithi
2024-08-05
Fix URL
Frederick Muriuki Muriithi
2024-08-05
Override 'client_secret_post' auth with a JSON equivalent
Frederick Muriuki Muriithi
2024-08-05
Move check for target_trait mb/chr into the if statement for ProbeSet/Geno da...
zsloan
2024-08-02
Consistently use JSON for all endpoints.
Frederick Muriuki Muriithi
2024-08-01
Add mariadb package to database development container.
Arun Isaac
2024-08-01
Remove obsolete configurations.
Frederick Muriuki Muriithi
2024-08-01
bug: add missing `count_per_page` variable.
Frederick Muriuki Muriithi
2024-08-01
Use auto-created and auto-rotated JSON Web Keys
Frederick Muriuki Muriithi
2024-08-01
Use JWKs from auth server public endpoint
Frederick Muriuki Muriithi
2024-08-01
Add module to help with rotation of JSON Web Keys.
Frederick Muriuki Muriithi
2024-08-01
Fix correlation bug caused by a result trait not having a location
zsloan
2024-08-01
Fix misnamed variable that caused correlation location filter to not work
zsloan
2024-07-31
Fix collections import by allowing GET method for collections/add endpoint
zsloan
2024-07-31
Improve logging
Frederick Muriuki Muriithi
2024-07-31
Synchronise token refreshes
Frederick Muriuki Muriithi
2024-07-30
Fix GN3 URIs for case attribute editing
zsloan
2024-07-29
Include trait and dataset name in hmac passed to search results page for non-...
zsloan
2024-07-27
Include CaseAttribute.InbredSetId in the query that fetches case attributes
zsloan
2024-07-27
Add BXD-JAX-OFS to BXD_GROUP_EXCEPTION
zsloan
2024-07-26
Use JSON rather than X-Form-URL-encoded data with auth server.
Frederick Muriuki Muriithi
2024-07-23
Run GN2 multithreaded by default
Frederick Muriuki Muriithi
2024-07-22
Provide PoC public-jwks endpoint.
Frederick Muriuki Muriithi
2024-07-20
Stop using the escape function for descriptions on the search result page
zsloan
2024-07-20
Also address the issue with trait IDs being detected as substrings for search...
zsloan
2024-07-20
Change text for Block filtering options to Filter to more accurately reflect ...
zsloan
2024-07-20
This prevents phenotype trait IDs (numeric search terms that are 5 digits in ...
zsloan
2024-07-17
Fix premature session expiration
Frederick Muriuki Muriithi
2024-07-17
Remove redundant import.
Frederick Muriuki Muriithi
2024-07-17
Remove token and user detail handling from @app.before_request
Frederick Muriuki Muriithi
2024-07-17
Reorganise code to do ALL configs at the top and then logging
Frederick Muriuki Muriithi
2024-07-12
Add two new links to tutorials page
zsloan
2024-07-12
Add Peak Chr and Peak Mb columns to ProbeSet export in the GN2 REST API
zsloan
2024-07-05
fix: show no_data instead of Loading when there is no results from search
John Nduli
2024-07-05
fix: correct javascript if statement
John Nduli
2024-07-05
fix: datatables error when search returns empty result
John Nduli
2024-07-05
fix: cleaner handling for gsearch errors
John Nduli
2024-07-03
Add link to GeneCup to tool buttons
zsloan
2024-07-01
Link to global search syntax document as markdown on github
zsloan
2024-06-27
Put SQL search code into function, and default to that function if the Xapian...
zsloan
2024-06-27
Automatically decide whether to use Xapian or SQL (uses Xapian if possible) +...
zsloan
2024-06-27
Increase MAX_SEARCH_RESULTS to 50000
zsloan
2024-06-27
Fix LRS/LOD Xapian searches when there are 5 terms (where position range is i...
zsloan
2024-06-27
Fix some issues with handling Xapian search output
zsloan
2024-06-27
Set default value for Mean and Additive Effect
zsloan
2024-06-27
Add default value for location and symbol
zsloan
2024-06-27
Create trait objects from Xapian search results to pass to DataTables
zsloan
2024-06-27
Raise ValueError if dataset type isn't ProbeSet/Publish/Geno
zsloan
2024-06-27
Add doctstrings for new functions in search_results.py
zsloan
2024-06-27
Begin adding Xapian queries for the non-global search and submit request to GN3
zsloan
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