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AgeCommit message (Expand)Author
2017-12-06Fixed drop-down group orderzsloan
2017-12-04Fixed drop-down scripts to more appropriately deal with BXD300 groups (though......Added some header data to mapping output file Fixed links in Network Group nodes/edges zsloan
2017-11-22Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2017-11-22Added option to export csv of full mapping resultszsloan
2017-11-21Merge pull request #258 from lyan6/master...improved scatter plotszsloan
2017-11-17Fixed issue that caused GEMMA LOCO to not work on productionzsloan
2017-11-06Replaced Histogram and Bar Chart with Plotly version and added new Box Plot w......GEMMA now has option to select genotypes Updated dataset select dropdowns to be ordered correctly Fixed dataset select dropdowns for correlations to not show confidential datasets Added Skewness and Kurtosis to Basic Statistics table Fixed Verify and RNA-seq buttons on trait page Temporarily hardcoded Reference page until we get it to link with database zsloan
2017-10-02Merge branch 'testing' of github.com:genenetwork/genenetwork2Lei Yan
2017-10-02save as svg button workLei Yan
2017-09-22Fixed issue that caused covariates to not work for certain data set groupszsloan
2017-09-22Fixed issue that caused LOCO to not work when remapping or using single chrom...zsloan
2017-09-21LOCO should work with GEMMA (when BIMBAM available), though I still need to d...zsloan
2017-09-14Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2017-09-14Committing current progress towards implementing LOCO for GEMMA, not done yetzsloan
2017-09-14Merge pull request #264 from pjotrp/testing..../bin/genenetwork2: add GEM_PATH for gemma-wrapperzsloan
2017-09-14./bin/genenetwork2: add GEM_PATH for gemma-wrapperPjotr Prins
2017-09-13update Correlation Scatterplot formatLei Yan
2017-09-12Merge branch 'testing' of github.com:genenetwork/genenetwork2Lei Yan
2017-09-12change corr_scatterplot precision formatLei Yan
2017-09-07Updated show trait page to correctly show GEMMA options for certain data setszsloan
2017-09-07Added the script to convert bimbam to kinship matriceszsloan
2017-09-05Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2017-09-05Added file converting genofiles to bimbamzsloan
2017-09-05Merge pull request #259 from pjotrp/testing...gemma-wrapper: find binary in profilezsloan
2017-09-04gemma-wrapper: find binary in profilePjotr Prins
2017-08-29Mostly changes related to getting gemma working with covariates and BIMBAM fi......Other changes include: - Fixing links in the network graph - Changing button colors on show trait page - Changing color scheme for heatmap - Making rows highlight in yellow when clicked on - Some changes to table appearance (like giving gene global search a horizontal scroll) zsloan
2017-08-23Update corr scatterplotLei Yan
2017-08-03remove bracketsLei Yan
2017-08-02Remove duplicate codesLei Yan
2017-08-02Merge branch 'testing' of github.com:genenetwork/genenetwork2Lei Yan
2017-08-02Update Correlation Scatterplot parametersLei Yan
2017-07-06Merge pull request #256 from genenetwork/development...Variety of changeszsloan
2017-07-06Merge branch 'testing' into developmentdevelopmentzsloan
2017-07-06Improved table appearance for global searches...Scatterplot Matrix works again Added the first few changes to get covariates working (not done yet) zsloan
2017-07-03Merge branch 'testing' of github.com:genenetwork/genenetwork2Lei Yan
2017-07-03Update Statistic table in Correlation ScatterplotLei Yan
2017-07-03Merge pull request #255 from lyan6/master...Correlation Scatterplot updateszsloan
2017-06-30Fix Correlation Scatterplot axis formatLei Yan
2017-06-29Update Correlation ScatterplotLei Yan
2017-06-28Update Correlation ScatterplotLei Yan
2017-06-26Merge branch 'testing' of github.com:genenetwork/genenetwork2Lei Yan
2017-06-26Merge branch 'master' of github.com:genenetwork/genenetwork2Lei Yan
2017-06-26Fix Correlation Scatterplot thingsLei Yan
2017-06-14Changed color scale for heatmap to blue <-> white <-> red...Removed an extraneous character in the gsearch_pheno html zsloan
2017-06-14Removed scatterplot matrix option since it isn't working correctly right now...Removed Download as PNG option for Probability Plot since it also isn't working yet zsloan
2017-06-14Added descriptions for GEMMA and PLINK as well as a warning about the issue w...zsloan
2017-06-13Fixed trait links in network graph nodes...Added warning notifying users that file upload option in the submit_trait page doesn't work yet zsloan
2017-06-13Added to border to table footer in search resultszsloan
2017-06-13Fixed issue that caused haplotype analyst to no longer work...Fixed Results table for centimorgan results to display cM instead of Mb zsloan
2017-06-13Fixed minor issue where the part of the legend describing the LRS/LOD line st...zsloan