| Age | Commit message (Expand) | Author |
|---|---|---|
| 2022-06-16 | Include json version of collection trait list, so it can be passed directly t... | zsloan |
| 2022-06-15 | templates: base: Update GN2 footer...* wqflask/wqflask/templates/base: Remove links to non-functioning mailing list. Remove link to "#genenetwork" channel that isn't currently owned/moderated. Co-authored-by: Ethan Willis <elwillis1@gmail.com> | BonfaceKilz |
| 2022-06-13 | Check chromosome for 'Un' in search results and print N/A in such cases | zsloan |
| 2022-06-13 | Check for chromosome of 'Un' and print location as 'Not available' in such cases | zsloan |
| 2022-06-13 | Increase width threshold for using scroller, to prevent issue with blue lines... | zsloan |
| 2022-06-13 | Limit search result descriptions to 500 characters | zsloan |
| 2022-06-13 | Add |safe to ensure HTML entites are correctly escaped for trait descriptions | zsloan |
| 2022-06-10 | Skip failing integration test...ATM, it's hard to by-pass the authentication decorators, and as such, skip this test for. This may be deleted later. | BonfaceKilz |
| 2022-06-10 | Reverse polarity for gemma additive effects in tests...Fixes broken test. See: #89a7868. | BonfaceKilz |
| 2022-06-07 | Define gn_server_url before running the drop-down menu JS code | zsloan |
| 2022-06-07 | Make indentation and spacing more consistent for...dataset_select_menu_orig.js | zsloan |
| 2022-06-07 | Fix issue that caused Submit Trait page drop-down menus to not work...Also removes a bunch of unnecessary console logging | zsloan |
| 2022-06-03 | Give speciesid single quotes like the other config_dic keys, just for consist... | zsloan |
| 2022-06-03 | Allow GenoFreezeId to be passed in configurations to load_genotypes.py | zsloan |
| 2022-06-01 | Fix the way R/qtl is called in the GN2 REST API | zsloan |
| 2022-06-01 | Remove IDs called 'submit' to prevent forms from breaking...Apparently if a button has an ID called 'submit', trying to submit a form via JS won't work | zsloan |
| 2022-05-31 | Check if entered pubmed_id is already associated with a publication, and...set PublishXRef.PublicationId equal to that Id if it exists | zsloan |
| 2022-05-31 | Reverse polarity for gemma additive effects...This is basically just a quick pseudo-fix to at least get the polarity right | zsloan |
| 2022-05-31 | Fix minor bug | Frederick Muriuki Muriithi |
| 2022-05-31 | Fix error rendering...Render the command_id if present in the error report to help with troubleshooting failures. | Frederick Muriuki Muriithi |
| 2022-05-27 | Apply python-black on file | BonfaceKilz |
| 2022-05-27 | Don't make a POST if there's a blank form-element | BonfaceKilz |
| 2022-05-27 | Move SQL queries to GN3 | BonfaceKilz |
| 2022-05-27 | Strip data before storing it | BonfaceKilz |
| 2022-05-27 | Make sure the user is logged in when approving data | BonfaceKilz |
| 2022-05-27 | Pass secend arg to cursor.execute as a tuple | BonfaceKilz |
| 2022-05-27 | Add sensible styling to "reject"/"approve" buttons | BonfaceKilz |
| 2022-05-27 | Align "Add New" button with the actions column | BonfaceKilz |
| 2022-05-27 | Add js logic to POST to "approval" endpoint | BonfaceKilz |
| 2022-05-27 | Assign the correct value to key | BonfaceKilz |
| 2022-05-27 | Display description diff-data if it exists | BonfaceKilz |
| 2022-05-27 | Ony show the title if there are any changes to be approved/rejected | BonfaceKilz |
| 2022-05-27 | Cosmetic changes in Jinja template | BonfaceKilz |
| 2022-05-27 | Add new endpoint for "approving" case-attributes modifications...* wqflask/wqflask/metadata_edits.py (approve_case_attribute_data): New end-point. | BonfaceKilz |
| 2022-05-27 | Remove dead comment | BonfaceKilz |
| 2022-05-27 | Append to "modifications" if "description"/"name" exist | BonfaceKilz |
| 2022-05-27 | Make sure is in editor's group to view the case-attributes...* wqflask/wqflask/metadata_edits.py (show_case_attribute_columns): Add "case_attributes_edit_access" and "login_required" decorators. | BonfaceKilz |
| 2022-05-27 | Make sure user is part of "editors" group to make (case attrs) edits...* wqflask/wqflask/decorators.py: Import "gn3.authentication.get_groups_by_user_uid". (case_attributes_edit_access): New decorator. Checks which users are in the "editors" group in Redis. * wqflask/wqflask/metadata_edits.py: Import "wqflask.decorators.case_attributes_edit_access" (update_case_attributes): Use "@update_case_attributes" decorator. (reject_case_attribute_data): Ditto. | BonfaceKilz |
| 2022-05-27 | Replace "_get_author" with "gn3.authentication.get_user_info_by_key"...* wqflask/wqflask/metadata_edits.py (_get_author): Delete function. (show_case_attribute_columns): Use "get_user_info_by_key". | BonfaceKilz |
| 2022-05-27 | Implement "reject"---for case-attr---endpoint...* wqflask/wqflask/metadata_edits.py (show_case_attribute_columns): Fetch id---this is already passed in the template---when getting case attributes. (reject_case_attribute_data): New endpoint for rejecting data. * wqflask/wqflask/templates/case_attributes.html: Add JS logic for rejecting data. | BonfaceKilz |
| 2022-05-27 | Move the case-attribute id to the button where the event occurs | BonfaceKilz |
| 2022-05-27 | Make approve/reject buttons normal links instead of embedded links | BonfaceKilz |
| 2022-05-27 | Remove unnecessary white space | BonfaceKilz |
| 2022-05-27 | Parse author id into a human readable name...* wqflask/wqflask/metadata_edits.py (_get_author): New function. (show_case_attribute_columns): Pass the author name and id---case-attribute---field into the template. * wqflask/wqflask/templates/case_attributes.html: Add an "author" column when displaying the modified/deleted/inserted data. Also, add the case-attribute's id as a data-id element. | BonfaceKilz |
| 2022-05-27 | Narrow the case-attribute column | BonfaceKilz |
| 2022-05-27 | Add extra sections for displaying delete/insert data | BonfaceKilz |
| 2022-05-27 | Fetch diff data from SQL...* wqflask/wqflask/metadata_edits.py (show_case_attribute_columns): Replace the redis fetch with SQL for retrieving diff data. | BonfaceKilz |
| 2022-05-27 | POST deletions | BonfaceKilz |
| 2022-05-27 | POST new inserts | BonfaceKilz |
| 2022-05-27 | Delete buggy js line...This generates a js error in the console log. | BonfaceKilz |
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