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chromosome view
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do more testing
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./bin/genenetwork2: add GEM_PATH for gemma-wrapper
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gemma-wrapper: find binary in profile
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file format
Other changes include:
- Fixing links in the network graph
- Changing button colors on show trait page
- Changing color scheme for heatmap
- Making rows highlight in yellow when clicked on
- Some changes to table appearance (like giving gene global search a horizontal scroll)
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Variety of changes
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Scatterplot Matrix works again
Added the first few changes to get covariates working (not done yet)
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Correlation Scatterplot updates
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Removed an extraneous character in the gsearch_pheno html
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Removed Download as PNG option for Probability Plot since it also isn't working yet
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with GEMMA where you can't run it simultaneously on two traits from the same group
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Added warning notifying users that file upload option in the submit_trait page doesn't work yet
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Fixed Results table for centimorgan results to display cM instead of Mb
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still appeared for manhattan plots
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development
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