| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2013-06-13 | Made a few changes while trying to figure out why the search isn't working | Zachary Sloan | |
| post-merging with Sam's code | |||
| 2013-06-13 | Merge /home/sam/gene into flask | Zachary Sloan | |
| Conflicts: wqflask/wqflask/templates/index_page.html Merging the code on Sam's branch onto my own | |||
| 2013-06-13 | Put the template html for the quick search page when all trait types | Zachary Sloan | |
| are displayed in a separate file that is included in quick_search.html | |||
| 2013-06-13 | Small changes | Sam | |
| 2013-06-12 | Fixed a couple issues with the template that caused the | Zachary Sloan | |
| regular search results and show trait page to not display | |||
| 2013-05-31 | Fixed the location column for the quick search page | Zachary Sloan | |
| Began writing some jquery to automatically open the first tab within each species tab on the quick search page (not done yet) | |||
| 2013-05-23 | Added a template | Sam | |
| 2013-05-23 | Lots of changes around users | Sam | |
| 2013-05-21 | Added caching to the search page (for both regular and quick searckes) | Zachary Sloan | |
| 2013-05-17 | Did a little work with quick search page | Zachary Sloan | |
| 2013-05-17 | Simplification of modal code | Sam | |
| Created css file to hold modal padding | |||
| 2013-05-17 | Modal windows now working better | Sam | |
| Going to simplify the code next | |||
| 2013-05-17 | Added flask_security locally | Sam | |
| 2013-05-17 | More working on security templates | Sam | |
| 2013-05-16 | Switching between login and register working pretty well | Sam | |
| 2013-05-16 | Made the first level of quick search tabs species, followed by | Zachary Sloan | |
| trait type (was the opposite before Rob commented on it earlier today) | |||
| 2013-05-16 | Before trying a new modal window | Sam | |
| 2013-05-10 | Sign in template looking even better | Sam | |
| 2013-05-10 | Sign in template looking pretty good | Sam | |
| 2013-05-10 | More security changes | Sam | |
| 2013-05-10 | Have the beginnings of a user_manager working | Sam | |
| 2013-05-09 | Just added some print statements so I can show matrix/vector | Zachary Sloan | |
| shapes to Tony | |||
| 2013-05-09 | Added original security templates (so we can change them) | Sam | |
| 2013-05-09 | Working on user registration | Sam | |
| 2013-05-08 | Merge branch 'flask' of git://github.com/leiyan/genenetwork into flask | Zachary Sloan | |
| 2013-05-08 | Worked on correlation page | Lei Yan | |
| Wrote function in dataset.py that gets all the traits in a dataset and their sample values | |||
| 2013-05-07 | Made some progress adding species/group tabs to the quick search result page to | Zachary Sloan | |
| make the results easier to navigate | |||
| 2013-05-02 | Got quick search code running (but not displaying properly) | Zachary Sloan | |
| Code that processes subset of snps works, in process of putting into a class | |||
| 2013-04-30 | Merge branch 'flask' of git://github.com/leiyan/genenetwork into flask | Zachary Sloan | |
| 2013-04-30 | Changed path to log file | Lei Yan | |
| Added server port to configuration file | |||
| 2013-04-30 | Did a little with correlation_plot.py | Zachary Sloan | |
| 2013-04-26 | Added file that checks how much time is added to a loop's runtime by print ↵ | Zachary Sloan | |
| statements Continued work on file that processes each individual chunk of the snp iterator/plink input | |||
| 2013-04-24 | Began writing code that writes some objects used in LMM to redis | Zachary Sloan | |
| and writes/reads eachitem in the plink_input | |||
| 2013-04-24 | Added original pylintrc | Zachary Sloan | |
| 2013-04-24 | Checking in quick_search_table.py before using pylin | Zachary Sloan | |
| 2013-04-24 | Fixed issue with the part of quick_search_table.py that loads phenotype traits | Zachary Sloan | |
| 2013-04-23 | Created file correlation_plot.py for the correlation scatterplot | Zachary Sloan | |
| Reverted temp_data.py to previous version that doesn't include the "part" input (for chunks) Made change to lmm related to splitting main iterator into chunks Deleted a bunch of unnecessary commented out code from show_trait.py | |||
| 2013-04-19 | Fixed the issue with the x-axis coordinates for marker regression plot | Zachary Sloan | |
| 2013-04-18 | The plink_input is split into chunks that are stored in temp_data, but | Zachary Sloan | |
| we might decide to store it differently | |||
| 2013-04-18 | LMM code now reads in gzipped pickled plink snp iterator object | Zachary Sloan | |
| 2013-04-18 | input file is now loaded by pickle | Zachary Sloan | |
| 2013-04-17 | Created file with pickled SNPIterator (from input.py) data | Zachary Sloan | |
| for HLC datasets Still need to read in file | |||
| 2013-04-17 | Added a benchmark for running the chunks code on the list of snps | Zachary Sloan | |
| 2013-04-17 | Renamed chunk_test.py to chunks.py | Zachary Sloan | |
| 2013-04-17 | Updated chunk_test.py | Zachary Sloan | |
| 2013-04-17 | Added chunk_test.py which compared my/ and sam's split into | Zachary Sloan | |
| chunks algorithms' accuracy/speed | |||
| 2013-04-17 | Wrote code that tests the effectiveness of the function that divides a | Zachary Sloan | |
| list into a given number of chunks | |||
| 2013-04-17 | Fixed small issue with the divide_into_chunks function | Zachary Sloan | |
| that caused one too many chunks to be created | |||
| 2013-04-16 | Wrote functions that divide a list into a specified number of chunks | Zachary Sloan | |
| (to be used on the list of snps for the LMM code) | |||
| 2013-04-16 | Checking in before making some changes | Zachary Sloan | |
 |
index : genenetwork2 | |
| GeneNetwork (2nd generation) |
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