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genenetwork2
acenteno
authentication_test
blatseq_fix
chores/code-refactoring
chores/lmdb-integration
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lmdb-code/refactoring
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notebooks_api
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partial-correlations
partial_corr_ui_rework
pcorrs_targets
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phewas
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refactor-data_set_py-20220920
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Author
2021-08-12
Get case attribute descriptions from DB and display them as mouseover titles ...
zsloan
2021-08-11
Fixed issue that caused case attribute columns to become unaligned if some st...
zsloan
2021-08-11
Sort by attribute ID instead of name in initialize_show_trait_tables.js when ...
zsloan
2021-08-10
Fixed the way n_samples is calculated for the loading page and mapping figure...
zsloan
2021-08-10
Fixed issue that caused correlations to not work with temp traits after switc...
zsloan
2021-08-10
Replaced forward slashes with underscores in the hashed filenames used by GEM...
zsloan
2021-08-09
Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing
zsloan
2021-08-09
Removed some paths that have been throwing errors in the logs constantly
zsloan
2021-08-06
gunicorn production settings: increase process refresh rate to clean up RAM. ...
...
the jitter switch.
Pjotr Prins
2021-08-05
Generate phenotype and covariate filenames for GEMMA from a hash of values an...
zsloan
2021-08-04
wqflask: views: Remove unnecessary casting for "count"
...
Sometimes, the "count" value can be an "x", as opposed to an int. With the cast, an un-handled error could be thrown.
BonfaceKilz
2021-08-04
wqflask: views: Replace hard-coded "/tmp" dir
BonfaceKilz
2021-08-03
Remove hard coded PATH for csvdiff binary
BonfaceKilz
2021-08-03
Replace TMPDIR hard-coded val with one set from flask
BonfaceKilz
2021-08-03
wqflask: views: Only show user's diff
BonfaceKilz
2021-08-03
Rename display_files.html -> display_files_admin.html
BonfaceKilz
2021-08-03
Reject diff data on click
BonfaceKilz
2021-08-03
Display a flash message after a file(and data) approval
...
squash! Display a flash message after a file(and data) approval
BonfaceKilz
2021-08-03
wqflask: views: After approval, rename the file at the right point
BonfaceKilz
2021-08-03
wqflask: views: Rename endpoint to "/admin/data-sample/diffs/"
BonfaceKilz
2021-08-03
wqflask: views: use dataset_id when inserting into metadata_audit
BonfaceKilz
2021-08-03
wqflask: views: Add dataset_id to diff json that'll be stored
BonfaceKilz
2021-08-03
wqflask: views: Add author name to generated diff's filename
BonfaceKilz
2021-08-03
templates: display_files: Add a a reject button
BonfaceKilz
2021-08-03
templates: edit_phenotype: Put csv "oownload" button above "Browse"
BonfaceKilz
2021-08-03
templates: edit_phenotype: Remove link to the approve page
BonfaceKilz
2021-08-03
wqflask: views: Flash messages during edits
BonfaceKilz
2021-08-03
wqflask: views: Get the publishdata_id from the file
BonfaceKilz
2021-08-03
wqflask: views: Filter out approved/ rejected files during display
...
* wqflask/wqflask/views.py (approve_data): Only show files that have not been approved/ rejected.
BonfaceKilz
2021-08-03
wqflask: views: Replace `update_raw` with `update_sample_data`
BonfaceKilz
2021-08-03
templates: edit_phenotype: Add some margin to links for csv download
BonfaceKilz
2021-08-03
templates: edit_phenotype: Properly centre form controls
BonfaceKilz
2021-08-03
templates: edit_phenotype: Use proper page header for this page
BonfaceKilz
2021-08-03
templates: edit_phenotype: add some form of padding upload button
BonfaceKilz
2021-08-03
edit_phenotype: Remove duplicate html
BonfaceKilz
2021-08-03
templates: edit_phenotype: Add file upload and "approval" buttons
BonfaceKilz
2021-08-03
templates: edit_phenotype: Add enctype to form cause of file uploads
BonfaceKilz
2021-08-03
wqflask: views: Return the json data for viewing
...
* wqflask/wqflask/views.py (display_file): New function.
BonfaceKilz
2021-08-03
wqflask: views: Approve data when the "approve" button is clicked
...
* wqflask/wqflask/views.py (approve_data): New function.
BonfaceKilz
2021-08-03
wqflask: views: Show diff files for the admin
...
* wqflask/wqflask/views.py (display_diffs_admin): New function. * wqflask/wqflask/templates/display_files.html: New template to show the diffs.
BonfaceKilz
2021-08-03
wqflask: views: Process file_csv if provided and get the diff
...
* wqflask/wqflask/views.py (update_phenotype): If a file is provided in the request, get the diff and store it in a data escrow.
BonfaceKilz
2021-08-03
wqflask: views: Remove un-necessary comment "#" sequence
BonfaceKilz
2021-08-03
wqflask: views: Edit end-point to use the phenotype-id
...
squash! wqflask: views: Edit end-point to use the phenotype-id
BonfaceKilz
2021-08-03
wqflask: views: Add endpoint for getting the csv data
BonfaceKilz
2021-07-23
minor fixes for test_correlation_page table columns
Alexander Kabui
2021-07-23
set compute_all for test_compute to True
Alexander Kabui
2021-07-23
handle missing tissue input data
Alexander Kabui
2021-07-13
Fixed corr_coeffient to corr_coefficient
zsloan
2021-07-12
Encode user_id as bytestring if not already bytestring to account for some us...
zsloan
2021-07-12
Merge pull request #590 from Alexanderlacuna/bugfix/rpy2-tissue-broken-links
...
replace rpy2 for tissue correlation
BonfaceKilz
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