genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Expand)	Author
2022-09-29	Replace MonadicDictCursor with generator function.	Arun Isaac
2022-09-29	Open xapian database once, but SQL database once for each query.	Arun Isaac
2022-09-29	Remove empty first line in docstrings.	Arun Isaac
2022-09-29	Ignore None values early when initializing MonadicDict.	Arun Isaac
2022-09-29	Return monadic value from MonadicDictCursor.fetchone.	Arun Isaac
2022-09-29	Abstract out writing documents into a xapian database.	Arun Isaac
2022-09-29	Close xapian database even if error occurs.	Arun Isaac
2022-09-29	Remove empty rows, and conversion for output	Frederick Muriuki Muriithi
2022-09-29	Add test for regression	Frederick Muriuki Muriithi
2022-09-28	Do not assume transactions in database connections.	Arun Isaac
2022-09-27	Fix indentation in get_species_list for-loop	zsloan
2022-09-27	Unit Test: Fix unit test for Chromosome functions.	Frederick Muriuki Muriithi
2022-09-26	Add REST API endpoint for viewing a group's genotype file metadata	zsloan
2022-09-26	Get heatmap and mapping working again with changing to species.py	zsloan
2022-09-26	Remove unused database_connection import from species.py	zsloan
2022-09-26	Implement global search using xapian.	Arun Isaac
2022-09-26	Add indexing script for global search.	Arun Isaac
2022-09-26	Add xapian database connection utilities.	Arun Isaac
2022-09-26	Generalize sql_uri function to get any setting.	Arun Isaac
2022-09-25	Fix issue where the display name was used in the hmac for phenotype traits	zsloan
2022-09-23	Remove click handler on global search.	Arun Isaac
2022-09-23	Check docstring style using pylint.	Arun Isaac
2022-09-22	Fix bug in GeneUtil.py query where extra quotes caused an error	zsloan
2022-09-22	Use passed in cursor instead of initialising a new cursor.	Frederick Muriuki Muriithi
2022-09-22	Provide database cursor as argument for TheSpecies and Chromosomes	Frederick Muriuki Muriithi
2022-09-22	Update tests: pass in missing arguments.	Frederick Muriuki Muriithi
2022-09-21	Added Markers/HumanMarkers import to datasetgroup.py and removed it from	zsloan
2022-09-21	Refactor: pass redis and db connections as argument	Frederick Muriuki Muriithi
2022-09-20	Make -logP columns uniform	zsloan
2022-09-20	Make -logP columns uniform	zsloan
2022-09-20	Re-add collect import to views.py	zsloan
2022-09-20	Make Search and Global Search Max -logP columns uniform	zsloan
2022-09-20	Fix gsearch ProbeSet query	zsloan
2022-09-20	Remove global `Dataset_Getter` variable	Frederick Muriuki Muriithi
2022-09-20	Revert "Use member variable `self.conn` to avoid test failure"	Frederick Muriuki Muriithi
2022-09-20	Use member variable `self.conn` to avoid test failure	Frederick Muriuki Muriithi
2022-09-20	Merge branch 'Alexanderlacuna-feature/generate-text-files' into testing	Frederick Muriuki Muriithi
2022-09-20	integrate use of text files	Alexander_Kabui
2022-09-20	store text files in TMPDIR	Alexander_Kabui
2022-09-20	write probeset datasets to text files	Alexander_Kabui
2022-09-20	Decompose file into separate modulesrefactor-data_set_py-20220920	Frederick Muriuki Muriithi
2022-09-19	Fix broken test	zsloan
2022-09-19	Remove commented-out html	zsloan
2022-09-19	Provide fixtures for test. Fix error to pass test.	Frederick Muriuki Muriithi
2022-09-19	Remove "wrong" assertions	Frederick Muriuki Muriithi
2022-09-19	Check paths before running gemma command	Frederick Muriuki Muriithi
2022-09-19	Improve error reporting for no mapping results	Frederick Muriuki Muriithi
2022-09-19	Check for file size before attempting parsing	Frederick Muriuki Muriithi
2022-09-19	Display correct error for missing file/directory	Frederick Muriuki Muriithi
2022-09-19	Refactor: raise appropriate error	Frederick Muriuki Muriithi