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working right now
Ran some end of line conversion on rqtl_mapping because there were a few ^M's
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a couple functions in collect.py to more accurately reflect when they're called
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Merge branch 'testing' into chfi
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Fixed CTL template to display correct number of traits (previously it would display 1 fewer than you selected).
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Throw error when TMPDIRs are not writable
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(should be changed some day)
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