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AgeCommit message (Collapse)Author
2019-12-31Fixed bug that occurred if you input 0 for bootstrap when using reaper for ↵zsloan
mapping
2019-12-31Gap between Y axis and LRS/LOD should now adjust appropriately for mapping ↵zsloan
results
2019-12-20Change needed to get info pages to work when there's no accession idzsloan
2019-12-20Made regular search work when using the phenotype IDs that include the 3 ↵zsloan
letter codes
2019-12-19Fixed issue that caused clicking the mapping tab to not work for certain ↵zsloan
datasets
2019-12-18Increased the bottom margin on the bar chart for situations with long sample ↵zsloan
names
2019-12-17Added RGD link to trait page and removed Genotation link since it isn't workingzsloan
2019-12-17Changed some text for mapping options related to MAFzsloan
2019-12-17Fixed Phenogen link from mapping resultszsloan
2019-12-17Moved Make Default button to a better place on home pagezsloan
2019-12-11Changed the way Group is listed on the trait page to match how Rob wanted itzsloan
2019-12-11Forgot to align N and SE columnszsloan
2019-12-11Also changed trait page table header alignments to match columns, which I ↵zsloan
forgot in last commit
2019-12-11Added a parameter indicating how to align case attributes in the sample ↵zsloan
table on the trait page (so that numbers are aligned right)
2019-12-11Fixed minor issue that caused chromosome in cis/trans LRS searches to not ↵zsloan
work when Chr was appended to it
2019-12-11Added some text explaining the new option to specifiy chromosome for ↵zsloan
cis/trans LRS searches, though Rob will probably want to edit
2019-12-11Missed a couple more places where I needed to account for letter chromosomeszsloan
2019-12-11Fixed issue where searching for X (or any letter) chromosome with position ↵zsloan
search didn't work
2019-12-10Inverted phenotype output for rqtl2zsloan
2019-12-09Fixed issue that caused collection list page javascript to not workzsloan
2019-12-09Added optional fourth term to cis/transLRS searches so you can specify which ↵zsloan
chromosome you want the max LRS to be on
2019-12-09Fixed minor issue that caused the sample list to be fetched incorrectly for ↵zsloan
a group groups
2019-12-05Fixed issue where you couldn't use letter chromosomes in searcheszsloan
2019-12-05Fixed issue that caused Y chromosome and mitochondrial markers to cause an errorzsloan
2019-12-04Added M to the possible non-number 'chromosome' nameszsloan
2019-12-04Changed export code to accept some missing paramterszsloan
2019-12-04Updated descriptions for mapping methods on trait pagezsloan
2019-12-04Mapping now also computes if you click the tab + some aesthetic changeszsloan
2019-12-04Made some minor changes to scatterplot pagezsloan
2019-12-04Fixed error that sometimes occurs if there's no mean expression and changed ↵zsloan
index page header style a little
2019-12-03Changed text when adding collection to reflect increased storage timezsloan
2019-12-03Added the filter and 'select top' buttons to collection list and view pageszsloan
2019-12-03Increased expiration time for anonymous collections to a yearzsloan
2019-12-03Changed search result export metadatazsloan
2019-12-02Added BXD NIA Longevity to list of BXD groups to show SNP track for that groupzsloan
2019-11-26Added biweight correlation option, though still need to probably add ↵zsloan
sub-options for it
2019-11-26Changed rqtl2 genotype download to export all datasets, not just phenotype ↵zsloan
ones + let user type in .zip extension
2019-11-25Fixed zipping to actually compress files - it wasn't beforezsloan
2019-11-22Added back JOSS link to footer that had mistakenly been removed in an ↵zsloan
earlier change
2019-11-21Use updated phenotype display IDs for all phenotypes with codes now, not ↵zsloan
just unpublished ones
2019-11-21Added option to download rqtl2 genotypes as zip, though still need to ↵zsloan
convert BIMBAM-only genotypes to rqtl2 format
2019-11-21Fixed title that said Genenetwork twicezsloan
2019-11-21Added 3-letter codes to unpublished phenotype traits and fixed issue with ↵zsloan
ordering phenotype results from searches
2019-11-14Changed code to rebuild dataset list each time you view the trait page to ↵zsloan
avoid having to restart each time a new dataset is added. Will need to keep an eye out for any issues, but doesn't seem to affect speed much Fixed logic for UniProt link to use UniProtId instead of protein ID
2019-11-13Stats figures now update axis titles to include transform if appliedzsloan
2019-11-13Fixed issue that caused a couple REST API queries to not workzsloan
2019-11-13Fixed some widths/spacing on index pagezsloan
2019-11-11Fixed issue that caused datatables error when case attributes missingzsloan
2019-11-11Slope for correlation scatterplot now displays as scientific notation if ↵zsloan
it's too small to display as 3 decimal places
2019-11-11Added option to search through sample table on trait pagezsloan
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