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2021-12-02Made Affiliates a subcategory of Linkszsloan
2021-12-02Changed index pagee HTML to be more consistent, adding indentation, removed ↵zsloan
commented out HTML
2021-12-02Increased min-width for showtrait-main-div to prevent mapping description ↵zsloan
text from overflowing
2021-12-02Increased mid-width for container element for mapping figure to prevent it ↵zsloan
from shrinking when the browser window is smaller (which prevents the links, etc, from overlapping properly with the image)
2021-12-01Figure out that we are using the wrong db_webqtl_s!Pjotr Prins
2021-12-01Introduce GN3_PYTHONPATH environment variablePjotr Prins
2021-11-27display_files.html: Place "approved" before "rejected" sectionBonfaceKilz
2021-11-25wqflask: metadata_edits: Support deletions and insertions from csvBonfaceKilz
2021-11-25Remove useless commentBonfaceKilz
2021-11-25Delete noisy loggingBonfaceKilz
2021-11-24Merge pull request #624 from Alexanderlacuna/feature/correlation-optimization2BonfaceKilz
Feature/correlation optimization2
2021-11-23wqflask: metadata_edits: Sort files from most recentBonfaceKilz
2021-11-23wqflask: metadata_edits: Remove "\n\n" check with something elseBonfaceKilz
In excel, "\n\n" is replaced with ",,,," and this leads to a value error.
2021-11-23wqflask: views: Make error messages properly formattedBonfaceKilz
2021-11-23fix for overwriting fileAlexander Kabui
2021-11-23resolve merge conflictsAlexander Kabui
2021-11-23pep8 formatting remove dead variablesAlexander Kabui
2021-11-23merge commit :added some logic that takes into account corr_sample_group ↵Alexander Kabui
when determining which samples to use when getting sample_data
2021-11-19Feature/fix wgcna api path (#630)Alexander Kabui
* add correct path gn3 api endpoint * remove ununsed dependencies;replace libraries with ones from guix * replace xterm cdn libs
2021-11-18Merge pull request #635 from acenteno/testingzsloan
Testing
2021-11-18update base by ACArthur Centeno
2021-11-18Update index_page by ACArthur Centeno
2021-11-18Updating tutorials by AC 11-18-21Arthur Centeno
2021-11-18Updating tutorials by AC on 11-18-21Arthur Centeno
2021-11-18Merge github.com:genenetwork/genenetwork2 into current_productionArthur Centeno
2021-11-18AC Updating base, index_page and tutorials on 11-18-21Arthur Centeno
2021-11-18refactor code for metadataAlexander Kabui
2021-11-18remove unused functions rename function namesAlexander Kabui
2021-11-18pep8 formatting;minor fixesAlexander Kabui
2021-11-17Changed the URL for editing trait metadata to use the dataset group ID ↵zsloan
instead of the PublishFreezeId
2021-11-17Fix issue where gene global search throws an error due to some traits not ↵zsloan
having a gene symbol (not sure why they don't in the DB, but the code defaults it to N/A now)
2021-11-17Merge pull request #634 from zsloan/bug/fix_gene_gsearchzsloan
Fix gene global search
2021-11-17Fixes gene global search error caused by some genes not having a symbol (not ↵zsloan
sure why this is in the DB; seems to have only happened recently)
2021-11-17add generic functio for generating filenameAlexander Kabui
2021-11-17refactor sql query & date formattingAlexander Kabui
2021-11-17README.org: Replace broken link with environments pageBonfaceKilz
2021-11-17Moven GN API doc to gn-docs repoPjotr Prins
2021-11-17update live jupyter notebooksjgart
2021-11-17update jupyter notebook link namejgart
This does not point to the launcher app but to the curated notebooks.
2021-11-17pep8 formatting;delete remove redis dependencyAlexander Kabui
2021-11-17isolate function to cache new traits metadataAlexander Kabui
2021-11-17isolate function to fetch the traits metadataAlexander Kabui
2021-11-17replace redis fetch for cached timestamp with a queryAlexander Kabui
2021-11-17isolate SQL_URI parse to a functionAlexander Kabui
2021-11-17use a dynamic value for the db_nameAlexander Kabui
2021-11-16Merge pull request #632 from Alexanderlacuna/tempfix/disable_cachingzsloan
Tempfix for reading from cache
2021-11-17temp disable traits metadata cacheAlexander Kabui
2021-11-17temp disable query cachingAlexander Kabui
2021-11-16use comprehension list;fix typoAlexander Kabui
2021-11-16pep8 formatting remove debug statementsAlexander Kabui