Age | Commit message (Expand) | Author |
---|---|---|
2013-07-03 | Updated notes and created requirements.txt file | Zachary Sloan |
2013-07-03 | Merge /home/zas1024/gene | Lei Yan |
2013-07-03 | Made the table in the group manager sortable, etc | Zachary Sloan |
2013-06-27 | Created a group manager page where user administrators can create...groups of datasets to give/add read privileges to | Zachary Sloan |
2013-06-27 | Fixed N Cases column on correlation results page | Lei Yan |
2013-06-26 | Merge /home/sam/gene | Zachary Sloan |
2013-06-26 | More signin changes | Sam |
2013-06-26 | Moved code creating DataSets object to a function in dataset.py...Added caching to creating DataSets object | Zachary Sloan |
2013-06-26 | Got code that creates DataSets object running...Fixed one genofile that had extra quotation marks in the comments that caused an error Defaults mb_graph_interval to 1 for species without chromosome lengths in megabases | Zachary Sloan |
2013-06-25 | Added DataSets class to dataset.py that will be used to create list of...confidential datasets | Zachary Sloan |
2013-06-25 | Merge git://github.com/zsloan/genenetwork into flask | Lei Yan |
2013-06-21 | Added a thank you for siging in message...Fixed issues where homepage was reloaded in modal after siging in | Sam |
2013-06-21 | Merge /home/zas1024/gene | Sam |
2013-06-21 | Working on getting logins working again | Sam |
2013-06-21 | Fixed bug where cursor was still being used in query | Zachary Sloan |
2013-06-20 | Removed foobar from top of notes.txt | Zachary Sloan |
2013-06-20 | Added fubar to the top of notes.txt | Zachary Sloan |
2013-06-20 | Merge branch 'flask' of /home/sam/gene...Conflicts: wqflask/wqflask/templates/index_page.html | Zachary Sloan |
2013-06-20 | Merge branch 'flask' | Zachary Sloan |
2013-06-20 | Committing before pulling from flask branch | Zachary Sloan |
2013-06-20 | Added explanation of pushing to github to notes | Zachary Sloan |
2013-06-20 | Added file corr_result_helpers.py that includes the function that...normalizes the lists of sample values | Zachary Sloan |
2013-06-20 | Fixed conflict of merge | Sam |
2013-06-20 | Merge branch 'flask' of git://github.com/leiyan/GeneNetwork2-Python into flask...Conflicts: wqflask/requirements.txt wqflask/wqflask/correlation/show_corr_results.py | Zachary Sloan |
2013-06-20 | Copied over Lei's correlation code from after he pushed yesterday | Zachary Sloan |
2013-06-19 | Moved the normalize_values function to separate file corr_result_helpers.py...Added docstring test to normalize_values Number of overlapping samples column now displays correctly in the correlation results page | Lei Yan |
2013-06-19 | Added nginx_conf directory to git tracking | Lei Yan |
2013-06-19 | Fixed issue where the Mean Expr, Max LRS, and Max LRS Location columns...in the correlation page weren't displaying | Lei Yan |
2013-06-19 | Merge branch 'flask' of git://github.com/zsloan/genenetwork into flask...Conflicts: wqflask/base/data_set.py | Lei Yan |
2013-06-19 | :Merge git://github.com/zsloan/genenetwork into flask...Conflicts: wqflask/requirements.txt | Lei Yan |
2013-06-19 | Changed QTL parameter name to "get_qtl_info" on trait.py and...other places it's called, like search_results.py Added other trait info fields to correlation results page | Lei Yan |
2013-06-19 | When I pulled Sam's code the search page was changed from GET to...POST in views.py, so I had to change it back | Zachary Sloan |
2013-06-19 | Merge branch 'flask' of git://github.com/leiyan/GeneNetwork2-Python into flask...Conflicts: wqflask/base/data_set.py wqflask/wqflask/views.py Fixed a couple conflicts to merge Lei's code related to the correlation page | Zachary Sloan |
2013-06-14 | Merge git://github.com/leiyan/GeneNetwork2-Python into flask...Conflicts: wqflask/requirements.txt Made small change for merge with Lei's branch | Zachary Sloan |
2013-06-13 | Made a few changes while trying to figure out why the search isn't working...post-merging with Sam's code | Zachary Sloan |
2013-06-13 | Merge /home/sam/gene into flask...Conflicts: wqflask/wqflask/templates/index_page.html Merging the code on Sam's branch onto my own | Zachary Sloan |
2013-06-13 | Fixed issue where too much memory was used as a result of creating a...dataset object for each trait in the correlation results Added new fields/columns for each trait in the correlation result table (max LRS, max LRS location, mean expression) Fixed error if trait doesn't have these fields | Lei Yan |
2013-06-13 | Put the template html for the quick search page when all trait types...are displayed in a separate file that is included in quick_search.html | Zachary Sloan |
2013-06-13 | Small changes | Sam |
2013-06-12 | Fixed a couple issues with the template that caused the...regular search results and show trait page to not display | Zachary Sloan |
2013-06-11 | Put trait info for correlation results page into a dictionary instead...of storing list of GeneralTrait objects Added print statements to track memory usage | Lei Yan |
2013-05-31 | Fixed the location column for the quick search page...Began writing some jquery to automatically open the first tab within each species tab on the quick search page (not done yet) | Zachary Sloan |
2013-05-30 | Rewrote some code in get_trait_info in dataset.py...Added spearman correlation to show_corr_results and template | Lei Yan |
2013-05-28 | Have correlation values appearing in a table in the template...Use scipy to calculate pearson correlation instead of old GN code | Lei Yan |
2013-05-23 | Worked on rewriting the function in data_set.py that gets the sample...values for each trait | Lei Yan |
2013-05-23 | Changed the way the query that gets sample ids is generated | Lei Yan |
2013-05-23 | Now calculates correlation values for traits, but not yet in template | Lei Yan |
2013-05-23 | Added a template | Sam |
2013-05-23 | Lots of changes around users | Sam |
2013-05-21 | Added caching to the search page (for both regular and quick searckes) | Zachary Sloan |