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genenetwork2
acenteno
authentication_test
blatseq_fix
chores/code-refactoring
chores/lmdb-integration
chores/replace-cdns
chores/script-textfile-generator
correlations-return-fewer-results
debug-too-many-connections-error
decouple_tools_and_wqflask_app
development
epysode
feature/search-history
feature/textfile-generator
gn-master
guix-shell
hook-up-auth-to-traits-page
itp_covariate_testing
jupyter_notebooks_ui
lmdb-code/refactoring
master
notebooks_api
oauth2-migrate-user-details-and-data
partial-correlations
partial_corr_ui_rework
pcorrs_targets
penguin2
phewas
production
proxy-integration
refactor-configurations
refactor-data_set_py-20220920
revert-366-360_update_htmlgen
rework-genotype-linking
run-corrs-in-external-process
stable
testing
GeneNetwork (2nd generation)
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Author
2016-04-19
Merge branch 'master' of github.com:genenetwork/genenetwork2 into development
zsloan
2016-04-18
Additive effect lines are now separated by chromosome (like the qtl line in t...
zsloan
2016-04-14
Fixed issue where qtl lines in interval mapping wouldn't connect between chro...
zsloan
2016-04-13
Moved the code getting the description/location because it was throwing an er...
zsloan
2016-04-13
Global search should be able to return description and location columns now
zsloan
2016-04-13
All the datatables stuff should be passable by AJAX now, just need to figure ...
zsloan
2016-04-12
Fixed order of columns in AJAX-loading global search and added trait link
zsloan
2016-04-11
Changing global gene search to use gsearch_gene.html instead of gsearch_gene_...
zsloan
2016-04-11
Figured out how to load results into dataTable using AJAX, but still need to ...
zsloan
2016-04-11
Changed the way trait data is retrieved for the global search page (it now ge...
zsloan
2016-04-07
Added option to change the maximum y-axis value for GN1 mapping figure
zsloan
2016-04-07
Permutation figure and x-axis label should change to correctly reflect the ma...
zsloan
2016-04-07
SNP Track option should now work for GN1 mapping figure
zsloan
2016-04-06
The option to switch between LRS and LOD for the GN1 mapping figure should no...
zsloan
2016-04-06
Setting lodm to always be 1.0 fixes the issue where it would incorrectly disp...
zsloan
2016-04-06
Permutations (suggestive/significant lines, legend, and histogram) should now...
zsloan
2016-04-05
Bootstrap test should now work correctly for qtl reaper mapping method on ful...
zsloan
2016-04-05
Fixed issue where haplotype analyst option would appear when using genetic(ce...
zsloan
2016-03-30
Disabled Haplotype Analyst option if mapping scale is centimorgan/genetic
zsloan
2016-03-30
GN1 mapping now when mapping scale is centimorgan (for R/qtl)
zsloan
2016-03-29
Additive effect option now works for GN1 mapping figure
zsloan
2016-03-29
Forgot to add GeneralObject file needed for haplotype analyst in last commit
zsloan
2016-03-29
Haplotype Analyst now works for GN1 mapping figure
zsloan
2016-03-28
Legend option now works for GN1 mapping figure
zsloan
2016-03-28
Trait sample data table width now dynamically changes with number of attribut...
zsloan
2016-03-24
Graph width can now be set in Mapping Results
zsloan
2016-03-24
Add the Gene Track option to display the Gene Band for single chromosome view
zsloan
2016-03-24
Mapping results table is now limited to the top 200 markers; previously the p...
zsloan
2016-03-23
You can now select chromosome and an Mb range from the top menu and remap
zsloan
2016-03-23
Fixed GN1 mapping plots so that Y axis and the Y coordinates of manhattan plo...
zsloan
2016-03-21
Manhattan plot option now works for GN1 map, and GEMMA is set to display as m...
zsloan
2016-03-21
Changed code parsing marker csv file to increase GEMMA speed
zsloan
2016-03-18
Forgot to not retrieve sample data for the phenotype global search with the l...
zsloan
2016-03-18
Merge branch 'development' of github.com:genenetwork/genenetwork2
zsloan
2016-03-18
Replaced header with other information in qtl map
zsloan
2016-03-17
Fixed a bunch of geno files that had most of their contents removed for some ...
zsloan
2016-03-15
Merge branch 'development' of github.com:genenetwork/genenetwork2
zsloan
2016-03-15
Merge branch 'master' of github.com:genenetwork/genenetwork2
zsloan
2016-03-15
Merge branch 'master' of github.com:genenetwork/genenetwork2 into development
zsloan
2016-03-15
Merge branch 'master' of https://github.com/genenetwork/genenetwork2
zsloan
2016-03-15
Fixed the mapping figure track that lets you zoom into a smaller range
zsloan
2016-03-15
Added mapping output file directory to gitignore
zsloan
2016-03-14
Changed the way headers look across all pages
zsloan
2016-03-03
Fixed issue where correlation would do mapping if run after mapping
zsloan
2016-03-03
Merge branch 'master' of github.com:genenetwork/genenetwork2 into development
zsloan
2016-03-03
Fixed trait export to include SE values
zsloan
2016-03-03
Merge branch 'master' of https://github.com/genenetwork/genenetwork2
zsloan
2016-03-03
Update gsearch.py
Lei Yan
2016-03-02
Increased gsearch speed by removing unnecessary query for sample data
zsloan
2016-03-01
Merge branch 'master' of https://github.com/genenetwork/genenetwork2
zsloan
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