| Age | Commit message (Expand) | Author |
|---|
| 2020-08-26 | Replace calls to "basestring with "str""•••See: <https://docs.python.org/2/library/2to3.html#2to3fixer-basestring>
| BonfaceKilz |
| 2020-08-26 | Fix failing tests that use python2-htmlgen•••* wqflask/tests/wqflask/marker_regression/test_display_mapping_results.py: Fix
tests.
| BonfaceKilz |
| 2020-08-26 | Replace python2-htmlgen with python-htmlgen•••* wqflask/wqflask/marker_regression/display_mapping_results.py: Use
python-htmlgen
| BonfaceKilz |
| 2020-08-26 | Update corestats import•••* wqflask/utility/Plot.py: import corestats from the utility module.
| BonfaceKilz |
| 2020-08-26 | Remove unused imports | BonfaceKilz |
| 2020-08-26 | Merge branch 'testing' into build/python3-migration | BonfaceKilz |
| 2020-08-25 | Merge pull request #427 from BonfaceKilz/Build/add-scientific-js-datatables-p...•••Build/add scientific js datatables plugin | zsloan |
| 2020-08-26 | Add check for "scientific.js" dataTables extension plugin•••* test/requests/link_checker.py (check_packaged_file): Add it.
| BonfaceKilz |
| 2020-08-25 | Merge pull request #425 from BonfaceKilz/refactor/extract-htmlgen-methods-to-...•••Refactor/extract htmlgen methods to wrapper class | zsloan |
| 2020-08-25 | Use scientific.js dataTables extension plugin from guix | BonfaceKilz |
| 2020-08-25 | Merge pull request #426 from BonfaceKilz/Build/use-naturaljs-datatables-exten...•••Build/use naturaljs datatables extensions | zsloan |
| 2020-08-24 | Add check for "natural.js" in Mechanical Rob•••* test/requests/link_checker.py (check_packaged_file): Add it.
| BonfaceKilz |
| 2020-08-24 | Use natural.js dataTables extension plugin from guix | BonfaceKilz |
| 2020-08-24 | Remove non-keyword args•••* wqflask/wqflask/marker_regression/display_mapping_results.py
(HtmlGenWrapper)[create_image_tag]: Remove "src" and "alt" as function
parameters.
| BonfaceKilz |
| 2020-08-24 | Replace "HtmlGen" method calls with those from "HtmlGenWrapper"•••* wqflask/wqflask/marker_regression/display_mapping_results.py
(DisplayMappingResults): Replace direct calls to HtmlGen with methods from
the constructed wrapper class "HtmlGenWrapper".
| BonfaceKilz |
| 2020-08-24 | Add new wrapper class for HtmlGen method•••* wqflask/wqflask/marker_regression/display_mapping_results.py: Add new class
| BonfaceKilz |
| 2020-08-24 | Add tests for the HtmlGenWrapper class•••* wqflask/tests/wqflask/marker_regression/test_display_mapping_results.py: Add
new tests
| BonfaceKilz |
| 2020-08-24 | Fix some pylint errors•••* wqflask/wqflask/marker_regression/display_mapping_results.py: Remove unused
imports and add fix some pylint errors
| BonfaceKilz |
| 2020-08-24 | Remove unused imports•••* wqflask/utility/Plot.py: Remove unused imports like "numarray". "numarray" is
does not have py3 support so it's important to remove references to it.
| BonfaceKilz |
| 2020-08-24 | Rename file•••* wqflask/tests/wqflask/marker_regression/test_display_mapping_results.py:
Rename test_display_marking_results.py to test_display_mapping_results.py
| BonfaceKilz |
| 2020-08-24 | Fix failing test•••* wqflask/tests/wqflask/api/test_gen_menu.py: Update assertion. Result data
introduced in 092212df
Signed-off-by: BonfaceKilz <bonfacemunyoki@gmail.com>
| BonfaceKilz |
| 2020-08-24 | Fixed issue where im_drawer wasn't being set in drawHaplotypeBand•••* wqflask/wqflask/marker_regression/display_mapping_results.py - defined
im_drawer in drawHaplotypeBand to fix errror and removed an unused
import
| zsloan |
| 2020-08-24 | The function draw_rotated_text_ was writing an image to /tmp, which GN2•••user apparently doesn't have access to, so I replaced it with a link to
the dynamically set TEMPDIR
* wqflask/utility/pillow_utils.py - Replaced "/tmp/" in image location
with TEMPDIR
| zsloan |
| 2020-08-23 | Use Python3 string methods•••* wqflask/utility/webqtlUtil.py (genRandStr): Replace "string.letters" with
"string.ascii_letters".
| BonfaceKilz |
| 2020-08-23 | Remove unused imports | BonfaceKilz |
| 2020-08-22 | Set min-width for search result table, since the description column•••often looks weird if it gets below a certain width
* wqflask/wqflask/templates/search_result_page.html - Set min-width of
table container div to 1500px since that seems to be a reasonable width
that prevents the description column from getting too narrow
| zsloan |
| 2020-08-20 | Changed Molecular Trait Datasets to Molecular Traits in the Type•••drop-down on the home page
* wqflask/wqflask/api_gen_menu.py - Changed where Molecular Trait
Datasets was hardcoded to Molecular Traits
| zsloan |
| 2020-08-20 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan |
| 2020-08-20 | Merge pull request #423 from BonfaceKilz/build/use-datatable-extensions-from-...•••Build/use datatable extensions from guix | zsloan |
| 2020-08-20 | Handle module renames in the standard library•••Run:
```
2to3-3.8 -f imports -w . && \
2to3-3.8 -f imports2 -w .
```
See: <https://docs.python.org/2/library/2to3.html#2to3fixer-imports> and
<https://docs.python.org/2/library/2to3.html#2to3fixer-imports2>
| BonfaceKilz |
| 2020-08-20 | Replace all references to python2.7 with python3.8•••Run:
```
find . -type f -print0 | xargs -0 sed -i \
"s|lib/python2.7/site-packages|lib/python3.8/site-packages|g"
```
| BonfaceKilz |
| 2020-08-20 | Disable python2 QTLReaper•••* wqflask/base/data_set.py: Remove usage of "reaper" to load datasets
| BonfaceKilz |
| 2020-08-20 | Add backward support for urllib•••* wqflask/base/trait.py: Remove unused imports
* wqflask/db/call.py (Bench): Add urllib2 fallback for python2
| BonfaceKilz |
| 2020-08-20 | Check the availability of datatables extension files from guix•••* test/requests/link_checker.py (check_packaged_js_files): Add it.
* test/requests/test-website.py: Use above method.
| BonfaceKilz |
| 2020-08-20 | Use dataTables.colResize.js and naturalSort from guix | BonfaceKilz |
| 2020-08-20 | Use buttons.colVis.min.js from guix | BonfaceKilz |
| 2020-08-20 | Use buttons.bootstrap.css from guix | BonfaceKilz |
| 2020-08-20 | Use scroller.dataTables.min.css from guix | BonfaceKilz |
| 2020-08-20 | Use dataTables.colReorder.js from guix | BonfaceKilz |
| 2020-08-20 | Use jquery.dataTables.js from guix | BonfaceKilz |
| 2020-08-20 | Use dataTables.buttons.min.js from guix | BonfaceKilz |
| 2020-08-20 | Use buttons.dataTables.min.css from guix | BonfaceKilz |
| 2020-08-19 | Added Invert button to collection page•••* wqflask/wqflask/templates/collections/view.html - Added the Invert
button back to the collection page; it was removed in the past but Rob
decided it should be re-added
| zsloan |
| 2020-08-19 | Tools used from the collection page now use all traits if no rows are•••checked and there are fewer than 100 traits in the table
* wqflask/wqflask/static/new/javascript/search_results.js - Created
get_traits_from_table function to get the list of traits and check if
none are selected, and also renamed the previous function also called
get_traits_from_table to submit_traits_to_export_or_bnw since that
better describes what the function does
| zsloan |
| 2020-08-19 | Show short labels by default in Correlation Matrix•••* wqflask/wqflask/templates/correlation_matrix.html - remove display:
none for short label div
| zsloan |
| 2020-08-19 | Remove extra whitespace(or add it) from comma separated items•••See: <https://docs.python.org/2/library/2to3.html#2to3fixer-urllib>
| BonfaceKilz |
| 2020-08-19 | Make Python more idiomatic•••Run `2to3-3.8 -f idioms -w .`
See: <https://docs.python.org/2/library/2to3.html#2to3fixer-idioms>
| BonfaceKilz |
| 2020-08-19 | Rename xrange() to range() and wrap existing range() calls with list•••See: <https://docs.python.org/2/library/2to3.html#2to3fixer-xrange>
| BonfaceKilz |
| 2020-08-19 | Handle the rename of urllib and urllib2 to the urllib package•••See: <https://docs.python.org/2/library/2to3.html#2to3fixer-urllib>
| BonfaceKilz |
| 2020-08-19 | Replace backtick repr with the repr() function•••* wqflask/base/trait.py: See
<https://docs.python.org/2/library/2to3.html#2to3fixer-repr>
| BonfaceKilz |
