Age | Commit message (Expand) | Author |
---|---|---|
2013-08-13 | Added several test files and the file with the class that...they import (browser_test.py) | Zachary Sloan |
2013-08-08 | Fixed issue where points in marker regression manhattan plot...weren't positioned on the x-axis | Zachary Sloan |
2013-08-07 | Fixed things with the dataset dropdowns and mRNA datasets...Improved the templates for a couple pages related to changing user password, etc | Zachary Sloan |
2013-08-02 | Fixed a bug related to groups with genofiles (not sure if it makes sense...for them not to have genofiles yet) | Zachary Sloan |
2013-07-30 | Just added some print statements to debug an issue with LMM code...Also added some to notes | Zachary Sloan |
2013-07-23 | Fixed a couple issues with he quick_search_table.py script...Added notes on using percona to optimise mysql to gn_installation_notes.txt Started moving "get_trait_data" to DataSet since it is the same regardless of the particular DataSet subclass (PhenotypeDataSet, MrnaAssayDataSet, etc) | Zachary Sloan |
2013-07-19 | Finished integrating code that reads sample list from geno files...withouot using reaper and caches results so it doesn't need to read the file every single time someone loads a page | Zachary Sloan |
2013-07-19 | Created file gen_group_samplelists that iterates through all genofiles...and builds each groups' samplelist | Zachary Sloan |
2013-07-18 | Added Amelie's rat data genotypes...Got human mapping mostly working Fixed dataset dropdown menus | Zachary Sloan |
2013-07-18 | Merge branch 'master' of https://github.com/zsloan/genenetwork...Conflicts: wqflask/base/webqtlConfigLocal.py wqflask/maintenance/gen_select_dataset.py wqflask/wqflask/static/new/javascript/dataset_menu_structure.json | Zachary Sloan |
2013-07-18 | Added to installation notes...Removed webqtlConfigLocal file containing passwords Updated main page dropdown menus (dataset_menu_structure.json) | Zachary Sloan |
2013-07-17 | Fixed gen_select_dataset.py...Appended redis installation info to notes | Zachary Sloan |
2013-07-16 | Merge branch 'master' of https://github.com/zsloan/genenetwork...Conflicts: misc/gn_installation_notes.txt | Zachary Sloan |
2013-07-16 | Wrote code that can get a dataset's type for every single GN...dataset; previously we could not view traits in datasets that were not in the DBType table in the database | Zachary Sloan |
2013-07-10 | Updated installation notes | root |
2013-07-10 | Updated gn_installation_notes | Zachary Sloan |
2013-07-09 | Committing installation notes before editing them more | Zachary Sloan |
2013-07-03 | Updated requirements.txt | Zachary Sloan |
2013-07-03 | Updated notes and created requirements.txt file | Zachary Sloan |
2013-07-03 | Made the table in the group manager sortable, etc | Zachary Sloan |
2013-06-27 | Created a group manager page where user administrators can create...groups of datasets to give/add read privileges to | Zachary Sloan |
2013-06-26 | Merge /home/sam/gene | Zachary Sloan |
2013-06-26 | More signin changes | Sam |
2013-06-26 | Moved code creating DataSets object to a function in dataset.py...Added caching to creating DataSets object | Zachary Sloan |
2013-06-26 | Got code that creates DataSets object running...Fixed one genofile that had extra quotation marks in the comments that caused an error Defaults mb_graph_interval to 1 for species without chromosome lengths in megabases | Zachary Sloan |
2013-06-25 | Added DataSets class to dataset.py that will be used to create list of...confidential datasets | Zachary Sloan |
2013-06-21 | Added a thank you for siging in message...Fixed issues where homepage was reloaded in modal after siging in | Sam |
2013-06-21 | Merge /home/zas1024/gene | Sam |
2013-06-21 | Working on getting logins working again | Sam |
2013-06-21 | Fixed bug where cursor was still being used in query | Zachary Sloan |
2013-06-20 | Removed foobar from top of notes.txt | Zachary Sloan |
2013-06-20 | Added fubar to the top of notes.txt | Zachary Sloan |
2013-06-20 | Merge branch 'flask' of /home/sam/gene...Conflicts: wqflask/wqflask/templates/index_page.html | Zachary Sloan |
2013-06-20 | Merge branch 'flask' | Zachary Sloan |
2013-06-20 | Committing before pulling from flask branch | Zachary Sloan |
2013-06-20 | Added explanation of pushing to github to notes | Zachary Sloan |
2013-06-20 | Added file corr_result_helpers.py that includes the function that...normalizes the lists of sample values | Zachary Sloan |
2013-06-20 | Fixed conflict of merge | Sam |
2013-06-20 | Merge branch 'flask' of git://github.com/leiyan/GeneNetwork2-Python into flask...Conflicts: wqflask/requirements.txt wqflask/wqflask/correlation/show_corr_results.py | Zachary Sloan |
2013-06-20 | Copied over Lei's correlation code from after he pushed yesterday | Zachary Sloan |
2013-06-19 | Added nginx_conf directory to git tracking | Lei Yan |
2013-06-19 | Fixed issue where the Mean Expr, Max LRS, and Max LRS Location columns...in the correlation page weren't displaying | Lei Yan |
2013-06-19 | Merge branch 'flask' of git://github.com/zsloan/genenetwork into flask...Conflicts: wqflask/base/data_set.py | Lei Yan |
2013-06-19 | :Merge git://github.com/zsloan/genenetwork into flask...Conflicts: wqflask/requirements.txt | Lei Yan |
2013-06-19 | Changed QTL parameter name to "get_qtl_info" on trait.py and...other places it's called, like search_results.py Added other trait info fields to correlation results page | Lei Yan |
2013-06-19 | When I pulled Sam's code the search page was changed from GET to...POST in views.py, so I had to change it back | Zachary Sloan |
2013-06-19 | Merge branch 'flask' of git://github.com/leiyan/GeneNetwork2-Python into flask...Conflicts: wqflask/base/data_set.py wqflask/wqflask/views.py Fixed a couple conflicts to merge Lei's code related to the correlation page | Zachary Sloan |
2013-06-14 | Merge git://github.com/leiyan/GeneNetwork2-Python into flask...Conflicts: wqflask/requirements.txt Made small change for merge with Lei's branch | Zachary Sloan |
2013-06-13 | Made a few changes while trying to figure out why the search isn't working...post-merging with Sam's code | Zachary Sloan |
2013-06-13 | Merge /home/sam/gene into flask...Conflicts: wqflask/wqflask/templates/index_page.html Merging the code on Sam's branch onto my own | Zachary Sloan |