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2021-10-06Merge branch 'testing' of github.com:genenetwork/genenetwork2 into clustered_...Frederick Muriuki Muriithi
2021-10-06Enable selection of heatmap orientationFrederick Muriuki Muriithi
2021-10-06doc: docker-container.org: Remove python2 gn2 docker set-up commandBonfaceKilz
2021-10-06tests: test_run_mapping: Add missing "name" attribute to testsBonfaceKilz
2021-10-06tests: test_run_mapping: Add missing callsBonfaceKilz
2021-10-06tests: test_run_mapping: Fix failing assert when getting perm strataBonfaceKilz
2021-10-06tests: test_run_mapping: Add missing attribute to "self.trait"BonfaceKilz
2021-10-06tests: test_run_mapping: Add missing positional argument "vals_hash"BonfaceKilz
2021-10-04Moved REDIS_CONN back into if __name__ == '__main__' since it doesn't need to...zsloan
2021-10-04Changed the group.py script to replace user e-mails with IDs and to include i...zsloan
2021-10-04Changed get_user_groups to pull both the ID and details in the for loop from ...zsloan
2021-10-04Add group link for user member groupszsloan
2021-10-04scripts: group.py: Modify exit message when displaying updated dataBonfaceKilz
2021-10-04scripts: group.py: Remove "glom" dependencyBonfaceKilz
2021-10-04Decode redis response by defaultBonfaceKilz
2021-10-04Modify resource editing script to enable data backups & restorationBonfaceKilz
2021-10-04wqflask: resource_manager: Remove loggerBonfaceKilz
2021-10-04Add script that adds "editors" group to all resources in RedisBonfaceKilz
2021-10-04Add script for creating/ updating groups during authorisationBonfaceKilz
2021-10-04Remove "_scripts.html" and all it's referencesBonfaceKilz
2021-10-04new_security: login_user.html: Delete commented out blockBonfaceKilz
2021-10-04Replace hard-coded e-mails with gn-proxy queriesBonfaceKilz
2021-10-04Rename "admin_login_required" to "edit_access_required"BonfaceKilz
2021-09-27Apply pep-8 formattingBonfaceKilz
2021-09-27Remove variable-- named after a python keyword-- called "list"BonfaceKilz
2021-09-27Remove lengthy stack trace for 404, 400, 408 status codesBonfaceKilz
2021-09-25Add progress indicator. Handle errors.Frederick Muriuki Muriithi
2021-09-25Remove hard-coded URL; use configured URLFrederick Muriuki Muriithi
2021-09-23Clear any existing image on subsequent clicksFrederick Muriuki Muriithi
2021-09-23Move the heatmap display area to before the tableFrederick Muriuki Muriithi
2021-09-22Removed the Control for (marker) option from R/qtl for now since Danny mentio...zsloan
2021-09-22Fixed issue where the control marker parameter was being passed incorrectly t...zsloan
2021-09-22Only show most search page options if results exist; otherwise provide a link...zsloan
2021-09-22Added type='button' to the Delete Collection button within collections/view, ...zsloan
2021-09-22Remove references to reaper_version and code for running old qtlreaperzsloan
2021-09-22Cleanup codeFrederick Muriuki Muriithi
2021-09-22Test heatmap creation from serialized figureFrederick Muriuki Muriithi
2021-09-20Returned the GN1 url to gn1.genenetwork.org since it's apparently working wel...zsloan
2021-09-20Removed the reaper_version selection option, since original qtlreaper is no l...zsloan
2021-09-20Added back the option to edit privileges on trait pages, since the metadata e...zsloan
2021-09-20Prevent the default submit actionFrederick Muriuki Muriithi
2021-09-20Fix id used.Frederick Muriuki Muriithi
2021-09-20Move "Clustered Heatmap" button to separate formFrederick Muriuki Muriithi
2021-09-20Implement proof-of-concept code to submit dataFrederick Muriuki Muriithi
2021-09-20Provide UI elements for clustered heatmap generationFrederick Muriuki Muriithi
2021-09-16wqflask: views: Redirect to the correct URL after phenotype updateBonfaceKilz
2021-09-14Replace / with _ in the mapping results filename, due to / causing issues wit...zsloan
2021-09-14Replace / with _ in the file hashes in rqtl_mapping.py, since they get transl...zsloan
2021-09-13Change mapping export filename to use the path passed from run_mapping, inste...zsloan
2021-09-13Change mapping export filename to use the trait hashzsloan