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2022-01-27Highlight rows selected by filterByIndex...This adds the "selected" class to rows selected by filterByIndex, which adds highlighting to them I also made the variables in this part of the code camel cased zsloan
2022-01-27Changed var to letzsloan
2022-01-27Removed unused variables codezsloan
2022-01-27Added the div for showing the error when the Select Rows text has wrong syntaxzsloan
2022-01-27Replaced the try/catch with something checking for the correct pattern with r...zsloan
2022-01-27Added a comment explaining what the parseIndexString function doeszsloan
2022-01-27Replaced a confusing for loop with something that is (hopefully) easier to re...zsloan
2022-01-27Changed functions in search_results.js to be camelCased, except for change_bu...zsloan
2022-01-27Removed unnecessary variable from for-loop in parse_index_stringzsloan
2022-01-27Changed the placeholder text for the table search to Search Forzsloan
2022-01-27Added some JS disabling form submission on hitting Enter, so that users can h...zsloan
2022-01-27Moved the Show/Hide Columns text onto the same line as the buttons, to save a...zsloan
2022-01-27Changed the glossary question mark to appear at the very end of the colum tex...zsloan
2022-01-27Changed search result index column to be static (so it doesn't change when th...zsloan
2022-01-27Replaced the Select Top feature with one that functions more like the Block B...zsloan
2022-01-27Moved the Show/Hide Columns text before the column buttons to save vertical s...zsloan
2022-01-27Reordered search result options as described in Rob's 1/19/2022 e-mailzsloan
2022-01-27Make glossary link question marks italicized and redzsloan
2022-01-27Made the search result table wider for genotype results, since previously the...zsloan
2022-01-27Increased the width of the location columns a bit, since they were being push...zsloan
2022-01-27Replaced the info icon in the Peak LOD and Effect Size columns with a supersc...zsloan
2022-01-27Fix issue where Geno query was fetching from the chr_num column instead of th...zsloan
2022-01-27Increase Y of search result table to 1000px so more rows are visible without ...zsloan
2022-01-27This fixes an issue where you couldn't select more than 150-200 rows when sub...zsloan
2022-01-27Fix 'Bad substitution' issue...In posix shell, string indexing is undefined. This commit replaces the string indexing with a more portable implementation. Frederick Muriuki Muriithi
2022-01-26update live jupyter notebooks...Removed bonface's notebook until seaborn gets fixed. jgart
2022-01-26wqflask: Ignore diffs with |ε| < 0.001...* wqflask/wqflask/metadata_edits.py (update_phenotype): Filter out values with |ε| < 0.001 when generating the diff file. BonfaceKilz
2022-01-26user_login: Remove noisy debug statementBonfaceKilz
2022-01-25guix.scm: Inherit package from genenetwork2, not genenetwork3....The package definition was likely copied from the genenetwork3 repo resulting in this error. * guix.scm: Inherit package from genenetwork2, not genenetwork3. Arun Isaac
2022-01-17update saunak's live jupyter notebookjgart
2022-01-17update live jupyter notebooksjgart
2022-01-11Removed the deferRender setting, since it appears to revent DataTables API fr...zsloan
2022-01-06README: Document `guix shell' development process....* README.md: Clean up and document `guix shell' development process. Arun Isaac
2022-01-06guix.scm: Add guix.scm....* guix.scm: New file. Arun Isaac
2022-01-06README: Fix typo....* README.md: Change clinians to clinicians. Arun Isaac
2022-01-06bin: Stop execution on error....* bin/genenetwork2: Pass -e flag to sh. Arun Isaac
2022-01-06bin: Set shebang to sh instead of bash..../bin/sh is present on Guix System and other distros while /bin/bash is present only on other distros. * bin/genenetwork2: Set shebang to sh instead of bash. Arun Isaac
2022-01-06bin: Do not set environment variables set by guix shell....The Guix python package accepts GUIX_PYTHONPATH instead of PYTHONPATH. `guix shell' sets GI_TYPELIB_PATH, GIO_EXTRA_MODULES, GUIX_GTK3_PATH, GUIX_PYTHONPATH, PATH, R_LIB_SITE and XDG_DATA_DIRS when necessary. There is no need to set these environment variables explicitly. * bin/genenetwork2: Do not set GI_TYPELIB_PATH, GIO_EXTRA_MODULES, GUIX_GTK3_PATH, PATH, PYTHONPATH, R_LIBS_SITE and XDG_DATA_DIRS. * README.md [Development]: Remove paragraph on injecting python modules locally. Arun Isaac
2022-01-06bin: Set GN2_PROFILE from GUIX_ENVIRONMENT....`guix shell' sets the profile path in an environment variable---GUIX_ENVIRONMENT. There is no need to pass it explicity as an input in GN2_PROFILE. * README.md: Remove all references to GN2_PROFILE. * bin/genenetwork2: Set GN2_PROFILE from GUIX_ENVIRONMENT. Do not check the value of GN2_PROFILE now that it is set automatically. Remove all references to GN2_PROFILE in example invocations. Arun Isaac
2022-01-05metadata_edits.py: Remove duplicate importsBonfaceKilz
2022-01-05Display correct message on the # of editsBonfaceKilz
2022-01-05Insert data to db by checking the tracked deletions, mods, or adds...Prior to this, we only checked for the json files with contained the modifications. However, in the case of double deletions, and double inserts, the data would have been stored in the db anyway; which is a false representation of changes. BonfaceKilz
2022-01-05Check for any double-inserts or double-deletions...Track any double-inserts or double-deletions BonfaceKilz
2022-01-05Remove pudb debug statementsBonfaceKilz
2022-01-05metadata_edits: Return early if uploaded csv has not been editedBonfaceKilz
2022-01-05display_diffs: Remove in-line styling from "pre" tagBonfaceKilz
2022-01-05Remove pudb lineBonfaceKilz
2022-01-05display_diffs: Use datatables for every tableBonfaceKilz
2022-01-05Make "Files for approval:" text a "h2"BonfaceKilz
2022-01-05Add interface for displaying diffs in a html pageBonfaceKilz