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2020-11-01add row highlight on checkbox checked stateuditgulati
2020-11-01update class name to ServerSideTable and add docstringuditgulati
2020-11-01replace var to let for variables in loopsuditgulati
2020-11-01make the page more color consistentuditgulati
2020-11-01fix issue when empty_filed_count is not claculateduditgulati
2020-11-01move SnpPage to a generic class ServerSideuditgulati
2020-11-01cell rendering cannot be in columnDef, optimised createdRowuditgulati
2020-11-01remove debug loguditgulati
2020-11-01remove createdRow callback and move color rendering to column defs to ↵uditgulati
speedup rendering
2020-11-01fix issue with column sort; put 'Gene' column data in one lineuditgulati
2020-11-01server side processing working for snp browseruditgulati
2020-11-01add server side processing due to large tables in DataTables; work on ↵uditgulati
server-side processing API pending for sorting, paging etc
2020-11-01export only checked rows to csv; update csv file nameuditgulati
2020-11-01add export to CSV button to export current pageuditgulati
2020-11-01rotate strain headers 270 deguditgulati
2020-11-01align numeric data values to right, categorial values to centeruditgulati
2020-11-01reduce gap between first and second column in formuditgulati
2020-11-01500 rows per page for DataTablesuditgulati
2020-11-01fix typo in check_if_in_gene function while querying for species_id = 0uditgulati
2020-11-01add DataTables paginationuditgulati
2020-11-01make stains headers names horizontaluditgulati
2020-11-01Merge pull request #472 from Alexanderlacuna/test-branchBonfaceKilz
Adding more Test for show_trait module
2020-10-31Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into ↵Alexanderlacuna
test-branch
2020-10-31Removed a line adding the ceiling of the Max LRS to the Y axis, since it has ↵zsloan
the potential to cause an axis tick to appear above the figure * wqflask/wqflask/marker_regression/display_mapping_results.py - Removed a line adding the ceiling of the max LRS/LOD value to the Y axis
2020-10-31remove redundant classesAlexanderlacuna
2020-10-31use descriptive variable namesAlexanderlacuna
2020-10-31Use more descriptive variable and class namesAlexanderlacuna
2020-10-30Merge pull request #474 from zsloan/mapping_y_axis_fixzsloan
Mapping Y Axis Fix
2020-10-30Removed a line adding the ceiling of the Max LRS to the Y axis, since it has ↵zsloan
the potential to cause an axis tick to appear above the figure * wqflask/wqflask/marker_regression/display_mapping_results.py - Removed a line adding the ceiling of the max LRS/LOD value to the Y axis
2020-10-30add test for get_export_metadataAlexanderlacuna
2020-10-30Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into ↵Alexanderlacuna
test-branch
2020-10-29Merge pull request #473 from zsloan/reaper_bootstrap_fixzsloan
Reaper bootstrap fix
2020-10-29Fixed issue with single-chromosome mapping after the bootstrap fix and fixed ↵zsloan
error that occurred if either bootstrap or permutations were set to 0 * wqflask/wqflask/marker_regression/display_mapping_results.py - Cast self.qtlresults 'chr' as a string since the comparison between it and the chromosome names was faililng due to numeric chromosomes being int type + used a list comprehension that converts None to an empty string when creating a comma-joined string from the list of mapping output files
2020-10-29Merge branch 'testing' of github.com:genenetwork/genenetwork2 into ↵zsloan
reaper_bootstrap_fix
2020-10-29add test for show_traitAlexanderlacuna
2020-10-29Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into ↵Alexanderlacuna
test-branch
2020-10-29Merge pull request #469 from BonfaceKilz/bug/fix-cookies-verificationBonfaceKilz
Bug/Fix cookie verification bug
2020-10-29resolve merge conflictAlexanderlacuna
2020-10-29format fileAlexanderlacuna
2020-10-29remove print statement in for loopAlexanderlacuna
2020-10-29add test for show_trait/export_trait_dataAlexanderlacuna
2020-10-29Merge pull request #471 from BonfaceKilz/bug/replace-map-on-strip-methodBonfaceKilz
Bug/Replace map on strip with a list comprehension that calls strip()
2020-10-28Merge pull request #470 from zsloan/mapping_chr_view_fixzsloan
Fixed error when zooming into a chromosome when mapping
2020-10-28A non-string being used as a paramter in HT.Link caused an error after the ↵zsloan
Python3 switchover, so I converted it to a string * wqflask/wqflask/marker_regression/display_mapping_results.py - cast theGO["snpCount"] as a string
2020-10-29Replace map on strip with a list comprehension that calls strip()BonfaceKilz
* scripts/maintenance/readProbeSetSE_v7.py: In Python3 you can't map string.strip on a list of strings. Instead use a list comprehension and apply strip() on each element of the list. * wqflask/wqflask/marker_regression/plink_mapping.py: Ditto. * wqflask/wqflask/snp_browser/snp_browser.py: Ditto.
2020-10-28Use latin-1 encoding when converting hmac secret to bytesBonfaceKilz
* wqflask/utility/hmac.py (hmac_creation): Use latin-1 when serializing the hmac secret. This ensures that the behaviour of *verify_cookie* remains the same as in the python2 tip.
2020-10-28Add new test for hmac_creation with latin-1 secretBonfaceKilz
* wqflask/tests/utility/test_hmac.py (test_hmac_creation_with_cookie): New test. For this test, use a secret that behaves differently when encoded to either utf-8 or latin-1.
2020-10-28Add tests for cookie verificationBonfaceKilz
2020-10-28Merge pull request #468 from zsloan/export_fixzsloan
Fixed trait page export issue caused by Scroller
2020-10-28Fixed trait page export to work with Scroller + added metadata for ↵zsloan
non-Phenotype traits and column headers * wqflask/wqflask/show_trait/export_trait_data.py - Added metadata for non-Phenotype traits and column headers (which didn't previously exist) * wqflask/wqflask/static/new/javascript/show_trait.js - Changed export_sample_table_data to use DataTables API instead of just selecting from the DOM with JQuery
generated by cgit v1.2.3 (git 2.44.0) at 2024-11-24 19:03:32 +0000