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2020-05-12Mapping Rqtl using the correct way to use categorical covarsDanny Arends
2020-05-07Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into ↵Danny Arends
testing
2020-05-06Merge pull request #388 from BonfaceKilz/build/missing_columns_scriptPjotr Prins
Add missing columns to db downloaded from AWS
2020-05-06Merge pull request #390 from BonfaceKilz/build/use-guix-datatables-dependencyPjotr Prins
Build/use guix datatables dependency
2020-05-06Put in TODOs for MariaDB query and Design MatrixDanny Arends
2020-05-06Merge pull request #389 from DannyArends/testingzsloan
Fixed covariates in r/qtl mapping
2020-05-06Disable saving of RDataDanny Arends
2020-05-06Fix the covariate, added debug, more output to track what it is doingDanny Arends
2020-05-06Replace CSS dependencies for datatablesBonfaceKilz
2020-05-05Use GUIX javascript Datatables packageBonfaceKilz
2020-05-05Add missing columns to db downloaded from AWSBonfaceKilz
2020-05-04Working on covariate mapping, making sure the addcovars are numericDanny Arends
2020-04-29Merge pull request #385 from DannyArends/testingzsloan
Fixing loading of the ITP data as a 4way cross
2020-04-29Adding some debug, so we have some info in the outputDanny Arends
2020-04-29Fixing loading of the ITP data as a 4way cross, worked on ↵Danny Arends
http://gn2-test3.genenetwork.org/
2020-04-28Redis settingPjotr Prins
2020-04-28Remove old menu filePjotr Prins
2020-04-28Merge with conflictsPjotr Prins
2020-04-28Track requests and check for attribute so at least we get the right error:penguin2Pjotr Prins
GeneNetwork penguin2:genenetwork2:2.11-rc2-penguin2-0bca65695 http://gn2-test3.genenetwork.org/ ( 1:31PM UTC Apr 28, 2020) MISCONF Redis is configured to save RDB snapshots, but is currently not able to persist on disk. Commands that may modify the data set are disabled. Please check Redis logs for details about the error. (error) File "/home/wrk/opt/genenetwork2/lib/python2.7/site-packages/redis/connection.py", line 717, in read_response
2020-04-28settings: force SERVER_PORT to align with environment variablePjotr Prins
2020-04-28Added a script for a default runnerPjotr Prins
2020-04-28menuPjotr Prins
2020-04-27Added timeout for when/if it does the REST API query, so it doesn't hang ↵zsloan
indefinitely
2020-04-27Made change that should allow dataset structure to be loaded from Redis ↵zsloan
instead of the JSON file without breaking things
2020-04-26Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingPjotr Prins
2020-04-26Updated menuPjotr Prins
2020-04-26Merge master and testingmasterPjotr Prins
2020-04-26Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2020-04-26Updated default_settings to include default GN2 base urlzsloan
2020-04-26Removed the code that was still writing the database menu JSONzsloan
2020-04-26Merge pull request #382 from genenetwork/acentenoPjotr Prins
Acenteno
2020-04-26URL for finding servicesArthur Centeno
2020-04-26Merge branch 'stable' of https://github.com/genenetwork/genenetwork2 into stableArthur Centeno
2020-04-24Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into HEADGN2
2020-04-24Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2020-04-24Replaced hard-coded instances of GN2 urls with ones pulled from settings filezsloan
2020-04-24Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into HEADGN2
2020-04-24Merge pull request #381 from acenteno/testingzsloan
Add colleagues - credits link
2020-04-24Made a fix that should prevent the issue where new datasets cause an error ↵zsloan
when they're in search results
2020-04-23Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into HEADGN2
2020-04-23Changed Trait to Marker for the stats table when the trait is a genotype traitzsloan
2020-04-23Fixed issue where covariates weren't being passed when zooming in or remappingzsloan
Added loading paage for zooming/remapping Added temporary option for checking mapping scale in .geno files
2020-04-23Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into HEADGN2
2020-04-23Removed a line that was excluding Macaque from the drop-downs (and thus from ↵zsloan
the JSON file causing an error in the global search)
2020-04-23IgnorestablePjotr Prins
2020-04-23Merge branch 'stable' of github.com:genenetwork/genenetwork2 into stableGN2 Website
2020-04-23DocsPjotr Prins
2020-04-22Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into HEADGN2
2020-04-22Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2020-04-22Fixed a variety of issues related to users registering and logging inzsloan
GN2 should now work when Redis is empty
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