| Age | Commit message (Expand) | Author |
|---|
| 2022-01-04 | bin: Set shebang to sh instead of bash..../bin/sh is present on Guix System and other distros while /bin/bash is
present only on other distros.
* bin/genenetwork2: Set shebang to sh instead of bash.
| Arun Isaac |
| 2022-01-04 | bin: Do not set environment variables set by guix shell....The Guix python package accepts GUIX_PYTHONPATH instead of
PYTHONPATH. `guix shell' sets GI_TYPELIB_PATH, GIO_EXTRA_MODULES,
GUIX_GTK3_PATH, GUIX_PYTHONPATH, PATH, R_LIB_SITE and XDG_DATA_DIRS
when necessary. There is no need to set these environment variables
explicitly.
* bin/genenetwork2: Do not set GI_TYPELIB_PATH, GIO_EXTRA_MODULES,
GUIX_GTK3_PATH, PATH, PYTHONPATH, R_LIBS_SITE and XDG_DATA_DIRS.
* README.md [Development]: Remove paragraph on injecting python
modules locally.
| Arun Isaac |
| 2022-01-04 | bin: Set GN2_PROFILE from GUIX_ENVIRONMENT....`guix shell' sets the profile path in an environment
variable---GUIX_ENVIRONMENT. There is no need to pass it explicity as
an input in GN2_PROFILE.
* README.md: Remove all references to GN2_PROFILE.
* bin/genenetwork2: Set GN2_PROFILE from GUIX_ENVIRONMENT. Do not
check the value of GN2_PROFILE now that it is set
automatically. Remove all references to GN2_PROFILE in example
invocations.
| Arun Isaac |
| 2022-01-03 | Added something that should work as a 'universal' solution for decoding trait... | zsloan |
| 2022-01-03 | Fixed wrong logic for checking for null or empty string trait descriptions in... | zsloan |
| 2021-12-23 | If phenotype metadata is cached, authenticate for those traits (otherwise aut... | zsloan |
| 2021-12-23 | Set new_traits_metadata so caching is used (previously was always an empty dict) | zsloan |
| 2021-12-20 | This should fix ProbeSet trait descriptions in the search results, which prev... | zsloan |
| 2021-12-17 | Some updates to the DOL genotypes conversion script | zsloan |
| 2021-12-15 | Edited html for index page | zsloan |
| 2021-12-14 | Removed min-width from container div, since it seems to have preventd horizon... | zsloan |
| 2021-12-14 | Includes dataset name when creating SimpleNamespace dataset_ob, since it's ne... | zsloan |
| 2021-12-13 | Fixes issue that caused LRS searches that specify position to not work proper... | zsloan |
| 2021-12-13 | pep8 formatting | Alexander Kabui |
| 2021-12-13 | modify endpoint for test wgcna | Alexander Kabui |
| 2021-12-13 | modify template to show error generated | Alexander Kabui |
| 2021-12-13 | handle connection error & other exceptions | Alexander Kabui |
| 2021-12-13 | parse powers to use from form data | Alexander Kabui |
| 2021-12-13 | add new endpoint:for test gn3 wgcna | Alexander Kabui |
| 2021-12-07 | Made some changes to the index page HTML | Arthur Centeno |
| 2021-12-03 | Add mapping_scale to mapping_results.html forum inputs | zsloan |
| 2021-12-03 | Properly set start position for cM mapping, to prevent overflow + remove some... | zsloan |
| 2021-12-03 | Make sure mapping_scale is always physic when using GEMMA | zsloan |
| 2021-12-03 | Prevent points prior to the X axis from being displayed in mapping figure whe... | zsloan |
| 2021-12-02 | Gave the twitter feed div a background color to make it more visually distinc... | zsloan |
| 2021-12-02 | Moved the UIkit CSS from base.html to index_page.html (btw Arthur, never add ... | zsloan |
| 2021-12-02 | Removed colons from Links headers and removed margin-bottom for H2 elements | zsloan |
| 2021-12-02 | Made Affiliates a subcategory of Links | zsloan |
| 2021-12-02 | Changed index pagee HTML to be more consistent, adding indentation, removed c... | zsloan |
| 2021-12-02 | Increased min-width for showtrait-main-div to prevent mapping description tex... | zsloan |
| 2021-12-02 | Increased mid-width for container element for mapping figure to prevent it fr... | zsloan |
| 2021-12-01 | Figure out that we are using the wrong db_webqtl_s! | Pjotr Prins |
| 2021-12-01 | Introduce GN3_PYTHONPATH environment variable | Pjotr Prins |
| 2021-11-27 | display_files.html: Place "approved" before "rejected" section | BonfaceKilz |
| 2021-11-25 | wqflask: metadata_edits: Support deletions and insertions from csv | BonfaceKilz |
| 2021-11-25 | Remove useless comment | BonfaceKilz |
| 2021-11-25 | Delete noisy logging | BonfaceKilz |
| 2021-11-24 | Merge pull request #624 from Alexanderlacuna/feature/correlation-optimization2...Feature/correlation optimization2 | BonfaceKilz |
| 2021-11-23 | wqflask: metadata_edits: Sort files from most recent | BonfaceKilz |
| 2021-11-23 | wqflask: metadata_edits: Remove "\n\n" check with something else...In excel, "\n\n" is replaced with ",,,," and this leads to a value
error.
| BonfaceKilz |
| 2021-11-23 | wqflask: views: Make error messages properly formatted | BonfaceKilz |
| 2021-11-23 | fix for overwriting file | Alexander Kabui |
| 2021-11-23 | resolve merge conflicts | Alexander Kabui |
| 2021-11-23 | pep8 formatting remove dead variables | Alexander Kabui |
| 2021-11-23 | merge commit :added some logic that takes into account corr_sample_group when... | Alexander Kabui |
| 2021-11-19 | Feature/fix wgcna api path (#630)...* add correct path gn3 api endpoint
* remove ununsed dependencies;replace libraries with ones from guix
* replace xterm cdn libs | Alexander Kabui |
| 2021-11-18 | Merge pull request #635 from acenteno/testing...Testing | zsloan |
| 2021-11-18 | update base by AC | Arthur Centeno |
| 2021-11-18 | Update index_page by AC | Arthur Centeno |
| 2021-11-18 | Updating tutorials by AC 11-18-21 | Arthur Centeno |
