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2017-09-22Fixed issue that caused LOCO to not work when remapping or using single chrom...zsloan
2017-09-21LOCO should work with GEMMA (when BIMBAM available), though I still need to d...zsloan
2017-09-14Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2017-09-14Committing current progress towards implementing LOCO for GEMMA, not done yetzsloan
2017-09-14Merge pull request #264 from pjotrp/testingzsloan
2017-09-14./bin/genenetwork2: add GEM_PATH for gemma-wrapperPjotr Prins
2017-09-13update Correlation Scatterplot formatLei Yan
2017-09-12Merge branch 'testing' of github.com:genenetwork/genenetwork2Lei Yan
2017-09-12change corr_scatterplot precision formatLei Yan
2017-09-07Updated show trait page to correctly show GEMMA options for certain data setszsloan
2017-09-07Added the script to convert bimbam to kinship matriceszsloan
2017-09-05Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2017-09-05Added file converting genofiles to bimbamzsloan
2017-09-05Merge pull request #259 from pjotrp/testingzsloan
2017-09-04gemma-wrapper: find binary in profilePjotr Prins
2017-08-29Mostly changes related to getting gemma working with covariates and BIMBAM fi...zsloan
2017-08-23Update corr scatterplotLei Yan
2017-08-03remove bracketsLei Yan
2017-08-02Remove duplicate codesLei Yan
2017-08-02Merge branch 'testing' of github.com:genenetwork/genenetwork2Lei Yan
2017-08-02Update Correlation Scatterplot parametersLei Yan
2017-07-06Merge pull request #256 from genenetwork/developmentzsloan
2017-07-06Merge branch 'testing' into developmentdevelopmentzsloan
2017-07-06Improved table appearance for global searcheszsloan
2017-07-03Merge branch 'testing' of github.com:genenetwork/genenetwork2Lei Yan
2017-07-03Update Statistic table in Correlation ScatterplotLei Yan
2017-07-03Merge pull request #255 from lyan6/masterzsloan
2017-06-30Fix Correlation Scatterplot axis formatLei Yan
2017-06-29Update Correlation ScatterplotLei Yan
2017-06-28Update Correlation ScatterplotLei Yan
2017-06-26Merge branch 'testing' of github.com:genenetwork/genenetwork2Lei Yan
2017-06-26Merge branch 'master' of github.com:genenetwork/genenetwork2Lei Yan
2017-06-26Fix Correlation Scatterplot thingsLei Yan
2017-06-14Changed color scale for heatmap to blue <-> white <-> redzsloan
2017-06-14Removed scatterplot matrix option since it isn't working correctly right nowzsloan
2017-06-14Added descriptions for GEMMA and PLINK as well as a warning about the issue w...zsloan
2017-06-13Fixed trait links in network graph nodeszsloan
2017-06-13Added to border to table footer in search resultszsloan
2017-06-13Fixed issue that caused haplotype analyst to no longer workzsloan
2017-06-13Fixed minor issue where the part of the legend describing the LRS/LOD line st...zsloan
2017-06-12Merge branch 'development' of github.com:genenetwork/genenetwork2 into develo...zsloan
2017-06-12Added explanatory text to heatmap pagezsloan
2017-06-12Fix binary paths for GEMMA_COMMAND, PYLMM_COMMAND and PLINK_COMMANDPjotr Prins
2017-06-12Fixed issue where 0.0 values would be converted into X's on the trait pagezsloan
2017-06-09Merge /home/staging/gene into developmentzsloan
2017-06-09- Changed the way the genofile is set so different genofiles can be selected ...zsloan
2017-06-02Merge branch 'master' of github.com:genenetwork/genenetwork2 into developmentzsloan
2017-06-02Merge branch 'master' of https://github.com/genenetwork/genenetwork2zsloan
2017-06-02settings: GENENETWORK_FILESPjotr Prins
2017-06-02settings: do not enforce JS pathsPjotr Prins
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