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genenetwork2
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blatseq_fix
chores/code-refactoring
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refactor-data_set_py-20220920
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2022-12-21
Substitute mm10/hg38 with ref/source in display_mapping_results.py
zsloan
2022-12-21
Change homology logic to include lines that start/end outside of the
zsloan
2022-12-21
Replace hard-coded homology source file
zsloan
2022-12-21
Add code drawing homology band in mapping figure
zsloan
2022-12-21
Add showHomology parameter to mapping endpoint
zsloan
2022-12-21
Add code loading contents of homology file for given mb range
zsloan
2022-12-21
Add homology band option to run_mapping.py
zsloan
2022-12-21
Add homology band options to mapping template
zsloan
2022-12-15
Add BXD-NIA-AD to list of BXD-equivalent groups in display_mapping_results.py
zsloan
2022-12-15
Fix bug where changing a resource owner throws an error due to users without ...
zsloan
2022-12-15
Change if blocks in template to allow changing owner when an owner isn't curr...
zsloan
2022-12-14
Add description to REST API /traits output for phenotypes
zsloan
2022-12-13
Change default text_dir to TEXTDIR, since that points to the GN1 ProbeSet_Dat...
zsloan
2022-12-13
add check for file in web/ProbeSetFreeze_DataMatrix folder (#758)
Alexander Kabui
2022-12-12
Change logic in compute_correlation_rust so that it doesn't re-run the top 50...
zsloan
2022-12-06
Use a dataset's name to fetch it's metadata
Munyoki Kilyungi
2022-12-05
Put metadata fetching for show_trait_page in try/except to get it working again
zsloan
2022-12-05
scripts: add GN2 results parsing to parser script
Frederick Muriuki Muriithi
2022-12-03
jobs: Add debug UI
Frederick Muriuki Muriithi
2022-12-02
correlations: display "--" whenever "lit_corr" is None
Frederick Muriuki Muriithi
2022-12-02
correlations: Fix description
Frederick Muriuki Muriithi
2022-12-02
correlations: Format `sample_r` value correctly.
Frederick Muriuki Muriithi
2022-12-02
correlation: Remove unused argument
Frederick Muriuki Muriithi
2022-12-01
Return Chr and Mb separately for phenotype /traits API request
zsloan
2022-12-01
Fix Exception that's raised when query_sql returns None
Munyoki Kilyungi
2022-12-01
Reproduce ValueError when query_sql returns None
Munyoki Kilyungi
2022-12-01
Delete complicated unmaintainable test-cases marked for skipping
Munyoki Kilyungi
2022-12-01
Change API Phenotype query to get other fields, including Locus position
zsloan
2022-12-01
Variety of changes to basic stats figures
zsloan
2022-12-01
Prevent error when user account doesn't have an email address (which is curre...
zsloan
2022-12-01
Fix group-management URL
zsloan
2022-12-01
Remove min-width for trait page main div
zsloan
2022-12-01
Increase width of email/password inputs on login page + change some text
zsloan
2022-12-01
Add line-break below probability plot
zsloan
2022-11-30
Remove box plot (violin plot is enough)
zsloan
2022-11-30
Remove check for shortnames/fullnames in probeset metadata query
Munyoki Kilyungi
2022-11-29
remove unnecessary function argument (#754)
Alexander Kabui
2022-11-29
mechanical-rob: Activate correctness checks
Frederick Muriuki Muriithi
2022-11-28
Fix bugs in show_corr_results.py
zsloan
2022-11-28
Convert trait name to str, since phenotype trait names being numerical was ca...
zsloan
2022-11-28
this commit remove the stage for parsing rows to remove nan values
AlexanderKabui
2022-11-28
Fix bug where single chromosome mapping view wouldn't work for the X chromosome
zsloan
2022-11-28
Fetch the accession_id from the dataset object
Munyoki Kilyungi
2022-11-28
mechanical-rob: Add more tests for correctness
Frederick Muriuki Muriithi
2022-11-28
mechanical-rob: First test for correlations correctness
Frederick Muriuki Muriithi
2022-11-25
mechanical-rob: Parser for GN1 results and some sample results
Frederick Muriuki Muriithi
2022-11-23
Make some changes to prevent show_corr_results.py bugs (details below)
zsloan
2022-11-23
Replace GN3 library rdf queries with a call to a gn3 endpoint
Munyoki Kilyungi
2022-11-23
bug: Fix syntax error: missing comma
Frederick Muriuki Muriithi
2022-11-22
Merge branch 'Alexanderlacuna-bugfix/metadata-fetching' into testing
Frederick Muriuki Muriithi
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