| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2019-08-29 | Fixed remaining issue where columns didn't show up right and the mean/r ↵ | zsloan | |
| filter didn't work right for non-ProbeSet target datasets | |||
| 2019-08-29 | Added default Loading text for dropdowns | zsloan | |
| Changed order of columns for correlatoin page and removed Y scrolling Changed name and order of top menu items some | |||
| 2019-08-27 | Removed part of a query that was slowing down dropdown menu generation; ↵ | zsloan | |
| doesn't seem to be needed, but should keep an eye out for any issues | |||
| 2019-08-27 | Zooming on a chromosome now also zooms the genome browser | zsloan | |
| Added genome browser css because it wasn't previously committed | |||
| 2019-08-27 | Fixed issue that caused Variant Browser to stop working (related to change ↵ | zsloan | |
| to return query results as unicode) Fixed issue that was causing Indel results in the Variant Browser to not work | |||
| 2019-08-26 | Capitalized first letter in description on trait page | zsloan | |
| 2019-08-26 | Output filenames are now passed around when when zooming with the new ↵ | zsloan | |
| qtlreaper, so zooming into chromosomes and ranges should be faster Updated genome browser and fixed an issue where it created multiple copies when the tab was clicked repeatedly Added option to filter correlation page results by R and mean expression | |||
| 2019-08-23 | Genome Browser only loads when the tab is clicked now, for slower ↵ | zsloan | |
| computers/browsers | |||
| 2019-08-22 | Changed header drop-down menu layout | zsloan | |
| Added a couple new third party links Added link to GN1 trait page in trait pages Fixed gene global search table appearance | |||
| 2019-08-20 | Added horizontal scroll for mapping figure when window isn't wide enough | zsloan | |
| Changed the way some mapping options are displayed on trait page Changed the header for the stats table and bar graph to increase the trait description | |||
| 2019-08-16 | Added text for LOD searches back to index page | zsloan | |
| 2019-08-15 | Fixed bug related to adding LOD search that caused non-keyword searches to ↵ | zsloan | |
| not work | |||
| 2019-08-15 | Added change to make search result page description correct for LOD ↵ | zsloan | |
| searches, since that was missing from last commit | |||
| 2019-08-15 | LOD searches should now also work | zsloan | |
| 2019-08-14 | removed LOD text from index page until LOD search works and cleaned up ↵ | zsloan | |
| mapping options appearance/text some | |||
| 2019-08-14 | Genome browser now takes chromosome list and lengths as input so it will ↵ | zsloan | |
| work correctly with non-mouse species or centimorgan positions | |||
| 2019-08-13 | Updated text on main search page | zsloan | |
| 2019-08-13 | Annotation links for markers only appear if they're in our database now | zsloan | |
| 2019-08-12 | Fixed some things to update the genome browser and get it running correctly | zsloan | |
| Fixed issue where trait page for genotype traits didn't work Removed bad y axis title on probability plot | |||
| 2019-08-07 | Added Christian's genome browser, but still need to clean things up a bunch ↵ | zsloan | |
| since now it has to create two separate marker lists | |||
| 2019-08-07 | Fixed issue with non-LOCO GEMMA mapping | zsloan | |
| 2019-08-07 | Changed rn3 to rn6 for a couple external links on the trait page | zsloan | |
| Made some text bold on trait page details | |||
| 2019-08-02 | Updated phenogen link in mapping results | zsloan | |
| 2019-08-02 | Fixed issue that caused heatmap to not work | zsloan | |
| 2019-08-02 | Fixed issue where zooming into chromosomes or range didn't work with reaper | zsloan | |
| 2019-08-02 | Fixed issue where resizing correlation page could make buttons get pushed down | zsloan | |
| 2019-08-02 | Added the gif for the loading screen | zsloan | |
| 2019-08-01 | Updated aliases to get all species aliases and remove duplicates | zsloan | |
| 2019-08-01 | Added wikidata aliases | zsloan | |
| Fixed year to not be a hyperlink when no pubmed id Fixed first column width so it doesn't go onto two lines for trait details | |||
| 2019-08-01 | Replaced loading bar with a gif that should work in Safari | zsloan | |
| 2019-08-01 | Made some more aesthetic changes to various pages and charts/figures | zsloan | |
| Added some information to the mapping loading page | |||
| 2019-07-31 | Fixed header to not have a fixed width, and added min-widths to many pages ↵ | zsloan | |
| to avoid them ever looking strange when the window's width is lowered Significnatly improved correlation matrix output Fixed issue where zooming into Mb ranges with GEMMA mapping output often showed no results; this fix is not ideal and is just a way to work around the results currently not being sorted correctly. Later I should fix the sorting | |||
| 2019-07-30 | Fixed correlation matrix width, colors, and padding | zsloan | |
| 2019-07-29 | Fixed minor issue with previous commit | zsloan | |
| 2019-07-29 | Forgot to remove an unused import | zsloan | |
| 2019-07-29 | Added Christian's RUST qtlreaper as an option | zsloan | |
| 2019-07-26 | Fixed the intercept line and added information to top of figure | zsloan | |
| 2019-07-26 | Scatterplots should have consistent decimal places for axes now | zsloan | |
| 2019-07-23 | Added change to automatically update datasets list using rest api instead of ↵ | zsloan | |
| json file Removed option to edit certain html pages, like news, policies, etc | |||
| 2019-07-19 | Fixed issue where chr in lower case didn't work for LRS term search | zsloan | |
| 2019-07-18 | Made change that should fix encoding issue, fingers crossed | zsloan | |
| 2019-07-17 | Hopefully fixed the issue with weird characters in search result descriptions | zsloan | |
| 2019-07-17 | Error page should now correctly appear when doing LOCO mapping with GEMMA ↵ | zsloan | |
| (if there's no appropriate genotype file) | |||
| 2019-07-15 | Fixed issue where qnorm values were wrong | zsloan | |
| Fixed issue where traits couldn't be highlighted or added to a collection from global search results Fixed issue where third party links threw an error for some traits on the trait page Fixed issue where clicking a row's link unhighlighted it | |||
| 2019-07-06 | Fixed issue where spaces were inserted into descriptions for mRNA expression ↵ | zsloan | |
| data in the regular search Created default collection name when the user submits a collection without naming it | |||
| 2019-07-03 | Fixed bug for creating one of the third party links on the trait page | zsloan | |
| Changed text in several pages (submit trait, mapping error) Changed header menu structure some | |||
| 2019-07-01 | a | zsloan | |
| 2019-06-30 | Made external links on trait page open new tab/window | zsloan | |
| 2019-06-28 | Added regression lines to correlation scatterplots | zsloan | |
| Fixed bug when doing correlations of non-phenotype traits against phenotype datasets Changed color of manhattan plot points (subject to change) | |||
| 2019-06-25 | Added dropdown generation to REST API and switched to using it to generate ↵ | zsloan | |
| the main search page dropdown | |||
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index : genenetwork2 | |
| GeneNetwork (2nd generation) |
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