| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2018-02-10 | Fixing GEMMA LOCO | Pjotr Prins | |
| 2018-02-10 | Fixed finding PATHs - one return statement! | Pjotr Prins | |
| 2018-02-10 | Check for bimbam path and bail out if it is missing | Pjotr Prins | |
| 2018-01-31 | Merge pull request #275 from pjotrp/pjotr | zsloan | |
| Added cli swith and set timeout to 3 minutes for gunicorn-dev mode | |||
| 2018-01-31 | Startup: longer timeout for gunicorn-dev mode | Pjotr Prins | |
| 2018-01-31 | Startup: added -cli option | Pjotr Prins | |
| 2018-01-30 | Merge pull request #274 from pjotrp/pjotr | zsloan | |
| Add gunicorn support | |||
| 2018-01-30 | gunicorn dev and prod modes added | Pjotr Prins | |
| 2018-01-29 | Fixed gunicorn example | Pjotr Prins | |
| 2018-01-29 | Gunicorn works | Pjotr Prins | |
| 2018-01-29 | startup script: adapting for gunicorn | Pjotr Prins | |
| 2018-01-29 | Added checks in startup script, removed r-auwerx path | Pjotr Prins | |
| 2018-01-29 | Bumped version | Pjotr Prins | |
| 2018-01-24 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan | |
| 2018-01-24 | Added links for markers in mapping results table when genotypes exist in DB | zsloan | |
| Added more info to trait details for phenotype traits Changed order of mapping methods Fixed layout of mapping loading screen to hopefully be centered on different screen sizes Improved layout of some elements in mapping results page | |||
| 2018-01-04 | Merge pull request #270 from pjotrp/testing | zsloan | |
| Merge some older commits | |||
| 2017-12-20 | Added submit_bnw even though it isn't working yet, just so views.py doesn't ↵ | zsloan | |
| throw an error | |||
| 2017-12-20 | Fixed issue that caused Mb ticks to get out of alignment for mapping figure | zsloan | |
| 2017-12-20 | Fixed the way PLINK outputs phenotype files (though there's still some ↵ | zsloan | |
| problem preventing it from working) Added some code related to new plotly probability plot, though it's commented out until it looks how I want it to Added some code for adding the BNW link to GN2, though it's not working yet Updated dataset menu structure JSON file | |||
| 2017-12-20 | VERSION | Pjotr Prins | |
| 2017-12-20 | tools: find path for JS and gemma_wrapper | Pjotr Prins | |
| 2017-12-20 | Bring in some earlier work - mostly documentation and startup handling | Pjotr Prins | |
| 2017-12-06 | Fixed drop-down group order | zsloan | |
| 2017-12-04 | Fixed drop-down scripts to more appropriately deal with BXD300 groups ↵ | zsloan | |
| (though there's still a minor issue with a few datasets) Added some header data to mapping output file Fixed links in Network Group nodes/edges | |||
| 2017-11-22 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan | |
| 2017-11-22 | Added option to export csv of full mapping results | zsloan | |
| 2017-11-21 | Merge pull request #258 from lyan6/master | zsloan | |
| improved scatter plots | |||
| 2017-11-17 | Fixed issue that caused GEMMA LOCO to not work on production | zsloan | |
| 2017-11-06 | Replaced Histogram and Bar Chart with Plotly version and added new Box Plot ↵ | zsloan | |
| with Plotly GEMMA now has option to select genotypes Updated dataset select dropdowns to be ordered correctly Fixed dataset select dropdowns for correlations to not show confidential datasets Added Skewness and Kurtosis to Basic Statistics table Fixed Verify and RNA-seq buttons on trait page Temporarily hardcoded Reference page until we get it to link with database | |||
| 2017-10-02 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 | Lei Yan | |
| 2017-10-02 | save as svg button work | Lei Yan | |
| 2017-09-22 | Fixed issue that caused covariates to not work for certain data set groups | zsloan | |
| 2017-09-22 | Fixed issue that caused LOCO to not work when remapping or using single ↵ | zsloan | |
| chromosome view | |||
| 2017-09-21 | LOCO should work with GEMMA (when BIMBAM available), though I still need to ↵ | zsloan | |
| do more testing | |||
| 2017-09-14 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan | |
| 2017-09-14 | Committing current progress towards implementing LOCO for GEMMA, not done yet | zsloan | |
| 2017-09-14 | Merge pull request #264 from pjotrp/testing | zsloan | |
| ./bin/genenetwork2: add GEM_PATH for gemma-wrapper | |||
| 2017-09-14 | ./bin/genenetwork2: add GEM_PATH for gemma-wrapper | Pjotr Prins | |
| 2017-09-13 | update Correlation Scatterplot format | Lei Yan | |
| 2017-09-12 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 | Lei Yan | |
| 2017-09-12 | change corr_scatterplot precision format | Lei Yan | |
| 2017-09-07 | Updated show trait page to correctly show GEMMA options for certain data sets | zsloan | |
| 2017-09-07 | Added the script to convert bimbam to kinship matrices | zsloan | |
| 2017-09-05 | Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing | zsloan | |
| 2017-09-05 | Added file converting genofiles to bimbam | zsloan | |
| 2017-09-05 | Merge pull request #259 from pjotrp/testing | zsloan | |
| gemma-wrapper: find binary in profile | |||
| 2017-09-04 | gemma-wrapper: find binary in profile | Pjotr Prins | |
| 2017-08-29 | Mostly changes related to getting gemma working with covariates and BIMBAM ↵ | zsloan | |
| file format Other changes include: - Fixing links in the network graph - Changing button colors on show trait page - Changing color scheme for heatmap - Making rows highlight in yellow when clicked on - Some changes to table appearance (like giving gene global search a horizontal scroll) | |||
| 2017-08-23 | Update corr scatterplot | Lei Yan | |
| 2017-08-03 | remove brackets | Lei Yan | |
 |
index : genenetwork2 | |
| GeneNetwork (2nd generation) |
| aboutsummaryrefslogtreecommitdiff |