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2020-06-20Missed one issue introduced by last commitzsloan
2020-06-20Fixed ports for proxy (though I need to add the port to global variables) and...zsloan
2020-06-20Added some admin functionality and fixed issue with temp traitszsloan
2020-06-17A user's id is now set as a parameter if it doesn't already existauthentication_testzsloan
2020-06-17Fixed issue where removing traits from collection didn't work; previous fix w...zsloan
2020-06-17Adding all the authentication stuffzsloan
2020-06-17Fixed issue caused by mapping scale sometimes being wrong + fixed Verify linkzsloan
2020-06-17Fixed issue where removing traits and then running a tool from collection pag...zsloan
2020-06-05Commiting other current group/resource management code, plus the new fileszsloan
2020-06-04Added back in trait info queries for situations where the proxy isn't runningzsloan
2020-06-04Really should have split this into many more commits:...- Now use proxy to pull trait data and hide traits/results that the user doesn't have view permission for - Created a factory method for creating trait ob so it can return None when user doesn't have view permissions (this is why such a large number of files are changed) - Added metadata to permutation export - Added current group management code - Added fixed password verification e-mail code zsloan
2020-05-28Merge branch 'testing' of github.com:zsloan/genenetwork2 into testingzsloan
2020-05-28Added lines calling proxy for publish datasets + added some resource redis qu...zsloan
2020-05-23Changed row highlight color to the more pale yellow it was beforezsloan
2020-05-21More adjusting to table widthszsloan
2020-05-21Made search result table width variable again and fixed row highlighting, tho...zsloan
2020-05-21Fixed search page table widths by setting max-width, at least for the time beingzsloan
2020-05-20Fixed issue when some case attribute values don't exist + added phenogen link...zsloan
2020-05-18Added warning that 1 is being added when doing log transform on traits with s...zsloan
2020-05-18Partial fix to issue of the top margin being too small when using R/qtl and c...zsloan
2020-05-18Fixed Bar Chart left margin issue and fixed issue where 0 values didn't have ...zsloan
2020-05-18Fixed issue with phenotype correlation table and added Plotly Chart Studio li...zsloan
2020-05-13Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2020-05-13Merge pull request #393 from pjotrp/epysode...Remove eventletzsloan
2020-05-12Remove eventletepysodePjotr Prins
2020-05-12Merging Danny's changes and Bonface's changes to js importszsloan
2020-05-12Replaced redis_user_id with user_id since there's no real need for the first ...zsloan
2020-05-12Added change for F2s in r/qtl and fixed minor issue in save_user in redis_toolszsloan
2020-05-12Merge pull request #391 from DannyArends/testing...Working categorical covariates for Rqtlzsloan
2020-05-12Mapping Rqtl using the correct way to use categorical covarsDanny Arends
2020-05-07Fixed blatseq issue and geno correlation issueblatseq_fixzsloan
2020-05-07Committing current progress on group manager + a minor fix in dataset.pyzsloan
2020-05-07Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into te...Danny Arends
2020-05-06Merge pull request #388 from BonfaceKilz/build/missing_columns_script...Add missing columns to db downloaded from AWSPjotr Prins
2020-05-06Merge pull request #390 from BonfaceKilz/build/use-guix-datatables-dependency...Build/use guix datatables dependencyPjotr Prins
2020-05-06Added function for getting trait data type, plus added mapping scale changes ...itp_covariate_testingzsloan
2020-05-06Put in TODOs for MariaDB query and Design MatrixDanny Arends
2020-05-06Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2020-05-06Merge pull request #389 from DannyArends/testing...Fixed covariates in r/qtl mappingzsloan
2020-05-06Commiting a few minor changes plus returning rqtl_mapping.py to the same as o...zsloan
2020-05-06Disable saving of RDataDanny Arends
2020-05-06Fix the covariate, added debug, more output to track what it is doingDanny Arends
2020-05-06Replace CSS dependencies for datatablesBonfaceKilz
2020-05-05Use GUIX javascript Datatables packageBonfaceKilz
2020-05-05Add missing columns to db downloaded from AWSBonfaceKilz
2020-05-04Committing some changes for testing covariateszsloan
2020-05-04Working on covariate mapping, making sure the addcovars are numericDanny Arends
2020-05-01Aesthetic table changes to view collection and correlation result pagesproductionzsloan
2020-04-30Fixed the way it gets the N displayed on the loading pagezsloan
2020-04-29Changed a lot about how mapping scale is read and gave the option to change m...zsloan