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2016-05-29Add zenodo doiPjotr Prins
2016-05-29JOSS: add MQM citation and fix typov2.0Pjotr Prins
2016-05-29Merge branch 'rebase' into stagingPjotr Prins
2016-05-29Added JOSS paperPjotr Prins
2016-05-25Docs: database reverse engineeringPjotr Prins
2016-05-25Docs: database reverse engineeringPjotr Prins
2016-05-24Docs: phenotypesPjotr Prins
2016-05-18Merge pull request #3 from Brainiarc7/patch-3Pjotr Prins
Notes: We need to test some fields in the results page
2016-05-18Merge pull request #2 from Brainiarc7/patch-2Pjotr Prins
Added a new Navigation Test suite
2016-05-18tests: removed empty linesPjotr Prins
2016-05-18Notes: We need to test some fields in the results pageDennis E. Mungai
Not yet implemented. WIP. Expected: Run all ~250 fields.
2016-05-18Added a new Navigation Test suite Dennis E. Mungai
A new option for running the script is now available. See the output of ./test-website -n for usage.
2016-05-17Update URLPjotr Prins
2016-05-13Fixed path for IM bar plotPjotr Prins
2016-05-13Removing ref. to HTMLPATHPjotr Prins
2016-05-13Merge branch 'staging' of github.com:pjotrp/genenetwork2 into stagingPjotr Prins
2016-05-13Merge branch 'staging' of github.com:pjotrp/genenetwork2 into stagingPjotr Prins
2016-05-13WebqtlConfig.py: Constant handlingPjotr Prins
2016-05-13README: nginx configuration as reverse proxyPjotr Prins
2016-05-13Fix paths for imagesPjotr Prins
2016-05-13Nginx configurationPjotr Prins
2016-05-13Added IRC logPjotr Prins
2016-05-13Added IRC logPjotr Prins
2016-05-11README: nginxPjotr Prins
2016-05-11nginx: add README infoPjotr Prins
2016-05-11Nginx configuration examplePjotr Prins
2016-05-10Merge branch 'master' of github.com:genenetwork/genenetwork2 into merge_zachPjotr Prins
2016-04-29Fixed database link in trait page detailszsloan
2016-04-29Also fixed links in statistics section (for normal probability plot) and ↵zsloan
removed 'target=_blank's
2016-04-29Fixed links in correlation descriptions on trait page and removed ↵zsloan
target=_blank (so will not open in new window unless user specifies) Fixed javascript so description changes when user changes the method and "Type" option is removed for literature correlation
2016-04-29URL: removed _blank from first URLPjotr Prins
2016-04-29README: on missing modulesPjotr Prins
2016-04-29Updated mailing list URLPjotr Prins
2016-04-29Plotting: using cairo-png for headless environmentsPjotr Prins
2016-04-29MergePjotr Prins
2016-04-28Added option to export permutation results for mapping pagezsloan
Added data_scale to dataset objects and basic stats table will now check data scale when calculating range Made interval analyst results table work with datatables Changed the appearance of the basic stats table some by giving it a border
2016-04-28READMEPjotr Prins
2016-04-28Test: splitting out static URL testsPjotr Prins
2016-04-28Test: splitting out static URL testsPjotr Prins
2016-04-28Changed the defunct GeneRIF URL to a working Wikipedia URL (whichPjotr Prins
also points to the non-working NCBI link)
2016-04-27test: test for broken linksPjotr Prins
2016-04-27Test: get to trait pagePjotr Prins
2016-04-26Test: main page and first searchPjotr Prins
2016-04-26Interval mapping: fix font and image pathPjotr Prins
2016-04-26README: add environment paths infoPjotr Prins
2016-04-26Merging with Zach's latest branchPjotr Prins
2016-04-25Interval Analyst table mostly working, just need to work out a few more thingszsloan
2016-04-22Fixed issue where manhattan plot setting wasn't being carried over to single ↵zsloan
chromosome view for mapping results Removed a useless "if 1 == 1" line that was in marker_regression_gn1.py for testing.
2016-04-20Interval Mapping now correctly does interval mapping if Marker Regression ↵zsloan
isn't checked (it used to just "connect the dots" of the marker regression output) Changed "Manhattan Plot" label to "Marker Regr." to accurately reflect what the option does
2016-04-20Added borders to stats table in trait pagezsloan
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