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genenetwork2
acenteno
authentication_test
blatseq_fix
chores/code-refactoring
chores/lmdb-integration
chores/replace-cdns
chores/script-textfile-generator
correlations-return-fewer-results
debug-too-many-connections-error
decouple_tools_and_wqflask_app
development
epysode
feature/search-history
feature/textfile-generator
gn-master
guix-shell
hook-up-auth-to-traits-page
itp_covariate_testing
jupyter_notebooks_ui
lmdb-code/refactoring
master
notebooks_api
oauth2-migrate-user-details-and-data
partial-correlations
partial_corr_ui_rework
pcorrs_targets
penguin2
phewas
production
proxy-integration
refactor-configurations
refactor-data_set_py-20220920
revert-366-360_update_htmlgen
rework-genotype-linking
run-corrs-in-external-process
stable
testing
GeneNetwork (2nd generation)
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Author
2014-06-06
Implimented Karl Broman's lodchart code for the interval mapping function.
Zachary Sloan
2014-05-19
Fixed sorting on the show trait page
Zachary Sloan
2014-05-05
Committing a bunch of changes related to integrating GEMMA and
Zachary Sloan
2014-03-26
Got anonymous collections working correctly
Zachary Sloan
2014-02-28
Committing after creating AnonCollection class and before adding
Zachary Sloan
2014-02-28
Made some changes/comments to Lei's load_genotypes.py file
Zachary Sloan
2014-02-27
Began working on a TraitCollection.py file that will contain both the
Zachary Sloan
2014-02-26
Collection page now displays for temp/anon collections, but
Zachary Sloan
2014-02-25
Made some more progress towards getting anonymous collections working
Zachary Sloan
2014-02-25
Committing part-way through getting anonymous collections working
Zachary Sloan
2014-02-25
Merge /home/sam/gene
Zachary Sloan
2014-02-25
Added untracked file
Sam
2014-02-25
Just committing after messing with the marker regression plot
Zachary Sloan
2014-02-24
Chromosome zoom is working for the marker regression manhattan plot
Zachary Sloan
2014-01-30
The calculations for the manhattan plot are now run from the command
Zachary Sloan
2014-01-30
Added forgotten html page to repo
Sam
2014-01-30
Before trying to fix user login issue
Sam
2014-01-30
Most of the work is done towards running lmm.py from the command line
Zachary Sloan
2014-01-29
Limited number of markers in marker regression result table to
Zachary Sloan
2014-01-24
Added natural sort to sort the index column for the sample data in
Zachary Sloan
2014-01-23
Histogram is working
Zachary Sloan
2014-01-03
Wrote some code for the histogram figure
Zachary Sloan
2013-12-31
Finished code to remove a trait or multiple traits from a collection
Sam
2013-12-30
Fixed issue where box plots initially appeared below the bar chart
Zachary Sloan
2013-12-30
Collections changes
Sam
2013-12-18
Merge /home/zas1024/gene
Sam
2013-12-18
Fixed issue where "Type" and "Dataset" had no default values for
Zachary Sloan
2013-12-17
Added the option to choose which method to use for the interval
Zachary Sloan
2013-12-12
Put the code that rebuilds the bar chart into a function
Zachary Sloan
2013-12-11
Got sort by name/value buttons working and committing before trying
Zachary Sloan
2013-12-11
Got color by trait working, but still need to add a legend and make
Zachary Sloan
2013-12-05
Now trims selected trait's values by the samples of the primary trait and
Zachary Sloan
2013-12-05
Interval map graph now works properly
Zachary Sloan
2013-11-28
Adding to collection now shows collection you added to and has informative me...
Sam
2013-11-27
Clicking a trait in "color by trait" now gets all of its sample values
Zachary Sloan
2013-11-27
Can now view trait list of a collection after clicking the collection
Zachary Sloan
2013-11-26
Made some progress towards getting the traits inside a collection to display ...
Zachary Sloan
2013-11-25
Added HSNIH.json to ignore due to its size
Zachary Sloan
2013-11-25
Merge branch 'temp'
Zachary Sloan
2013-11-25
Got the interval mapping results into a table
Zachary Sloan
2013-11-22
Did some work towards getting the interval mapping page working
Zachary Sloan
2013-11-21
Added apt-get dist-upgrade to notes
Zachary Sloan
2013-11-20
Merge /home/zas1024/gene
Lei Yan
2013-11-20
Created a box plot
Zachary Sloan
2013-11-14
Can change the parameters of Sample Correlation Scatterplot
Lei Yan
2013-11-05
Merge /home/zas1024/gene
Lei Yan
2013-11-05
Add Correlation Scatter plot
Lei Yan
2013-11-01
In the process of opening a modal with the collection page inside
Zachary Sloan
2013-11-01
In the process of adding the function to color bar chart by the
Zachary Sloan
2013-11-01
Merge /home/sam/gene
Zachary Sloan
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