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2020-11-21Merge pull request #488 from BonfaceKilz/feature/fetch-md-files-from-gh-docs-......Feature/fetch md files from gh docs repoBonfaceKilz
2020-11-21Use docker image with markdown packaged...* .github/workflows/main.yml (jobs): [container]: Use image that is on python3-genenetwork "ad741c1" which has python-markdown packaged. BonfaceKilz
2020-11-20Replace mockobject with dataclasses...* wqflask/tests/unit/wqflask/test_markdown_routes.py (MockRequests404): Use dataclasses. (MockRequests200): Ditto. BonfaceKilz
2020-11-20Update tests to use new gn2-docs urlBonfaceKilz
2020-11-20Replace mistunes with markdown library...* wqflask/wqflask/markdown_routes.py (render_markdown): Use markdown library instead of mistunes. BonfaceKilz
2020-11-20Point url for fetching md content to gn-docs repo...* wqflask/wqflask/markdown_routes.py (render_markdown): Use gn-docs URL to fetch markdown content. BonfaceKilz
2020-11-20Remove glossary markdown template...* wqflask/wqflask/static/markdown/: Delete folder. Files moved to https://github.com/genenetwork/gn-docs BonfaceKilz
2020-11-18Fixed issue where the cofactor trait descriptions didn't work correctly...for genotype/snp cofactors (the code previously only accounted for probeset/phenotype cofactors, so it was treating genotypes/snps like phenotype traits) zsloan
2020-11-18Changed default Low/High colors for the correlation scatterplot cofactor...coloring to Blue/Red respectively (was originally Light Grey/Black) zsloan
2020-11-18Added some jquery closing the "Add To Collection" colorbox window after...its form is submitted zsloan
2020-11-18Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2020-11-18Fixed issue that was causing scatterplot cofactors to not work if the...cofactors were genotypes (because it tried to get the "description_display" which doesn't exist for genotype traits) zsloan
2020-11-18Removed console.log and commented out statements from...get_traits_from_collection.js zsloan
2020-11-18Fixed "back_to_collections" function in get_traits_from_collection.js...(function that lets you return from viewing a collection to viewing the list of collections when selecting cofactors for scatterplot) zsloan
2020-11-18Merge pull request #481 from Alexanderlacuna/test-SampleList...Test sample listBonfaceKilz
2020-11-16update refactored natural_sort function in show_trait/SampleList.pyAlexanderlacuna
2020-11-12Import fontawesome css/js and used its info character for glossary links on s...zsloan
2020-11-12Substituted -log(p) with -logP as mentioned in Rob's e-mailzsloan
2020-11-12Show Mb positions to 6 decimal places in mapping results tablezsloan
2020-11-11Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2020-11-11Added Bonface to the footerzsloan
2020-11-11Merge pull request #477 from BonfaceKilz/feature/add-glossary-page...Feature/add glossary pageBonfaceKilz
2020-11-11Merge branch 'testing' of github.com:genenetwork/genenetwork2 into feature/ad...BonfaceKilz
2020-11-11Update image widthBonfaceKilz
2020-11-11Add basic markdown styling...* wqflask/wqflask/static/new/css/markdown.css: New file. * wqflask/wqflask/templates/glossary.html: add markdown id to markdown container. BonfaceKilz
2020-11-10Changed logic for creating temp trait SampleList to account for both traits e...zsloan
2020-11-10Fixed issue where strain values in bytes needed to be decoded when loading a ...zsloan
2020-11-10Changed "BXD-Harvested" to "BXD-Longevity" since that group was renamed and u...zsloan
2020-11-10Add missing links and some markdown formatting(underline, bold)...* wqflask/wqflask/static/markdown/glossary.md: Update file. BonfaceKilz
2020-11-06Removed the page selection from the top of the table because it created an aw...zsloan
2020-11-06Changed the show/hide column buttons to use DataTables API + a few other chan......- Fixed a couple column header glossary links to point to GN1 - Added trait_list.css for styling a couple elements common to similar pages (like correlations or view collection) zsloan
2020-11-06Added min-width for the divs containing the analysis tools and table options,......Also made some indentation more consistent zsloan
2020-11-06Added new css file for pages that have trait list tables (not sure what else ...zsloan
2020-11-06Increased the min-width for the show_trait page container div for all the acc...zsloan
2020-11-06After I changed some class names in the trait page to use - instead of _ (to ...zsloan
2020-11-06remove whitespaceAlexanderlacuna
2020-11-06modify natural_sort and return list to avoid having side effectAlexanderlacuna
2020-11-06modify tests to for changes in the natural sort functionAlexanderlacuna
2020-11-06fix typoAlexanderlacuna
2020-11-05remove duplicatesAlexanderlacuna
2020-11-05add test for samplelist and show_traitAlexanderlacuna
2020-11-04Merge pull request #480 from zsloan/bug/correlation_sort_fix...Fix sorting on the Tissue and Literature r/rho columns in correlation pagezsloan
2020-11-04Changed numeric-html sorting for the Tissue/Lit r columns to natural-minus-na......* wqflask/wqflask/templates/correlation_page.html - Replaced numeric-html sorting with natural-minus-na for the lit/tissue r columns zsloan
2020-11-04Use new glossary link from glossary_blueprint in html templatesBonfaceKilz
2020-11-04Add missing imageBonfaceKilz
2020-11-04Add link markers to elements which are referenced from elsewhereBonfaceKilz
2020-11-04Update test_markdown_routes...* wqflask/tests/unit/wqflask/test_markdown_routes.py (test_render_markdown_when_fetching_locally): Fix failing test. BonfaceKilz
2020-11-04Add an edit link button to glossary pageBonfaceKilz
2020-11-04Wrap rendered content in div containerBonfaceKilz
2020-11-04Update glossary markdown fileBonfaceKilz