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2021-06-07templates: edit_trait: Use correct name for text-area fieldBonfaceKilz
2021-06-07templates: edit_trait: Add hidden inputs that contain old valuesBonfaceKilz
2021-06-07Update class docstring...Author: jgart <jgart@dismail.de> Date: Fri Jun 4 22:12:35 2021 +0000 jgart
2021-06-04Set widths for column in gene global search + set min-width for table as a wholezsloan
2021-06-03Change LRS scores of 0.000 to N/A since they're listed wrong in the DB + fix ...zsloan
2021-06-03Changed gsearch_pheno template to use Scroller and also set column widthszsloan
2021-06-03Implemented Scroller with gene global search; for the time being this disable...zsloan
2021-06-03Made the code for setting some trait fields (like additive, mean, max_lrs_tex...zsloan
2021-06-01Fixed issue that caused attribute alignments to be off by one positionzsloan
2021-06-01Made Genotype drop-down a little wider, since the genotype file names can be ...zsloan
2021-06-01Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingzsloan
2021-06-01Make the container div for the trait table have a minimum width scaling off o...zsloan
2021-06-01templates: edit_trait: Use correct textarea "name" for post_pub_descBonfaceKilz
2021-06-01templates: edit_trait: Add "changed" class to hidden input values...When a form element changes, it's marked as changed. Only input elements with "changed" get submitted. Since we need to submit the "hidden" input fields, we add "changed" to them anyways. BonfaceKilz
2021-06-01templates: edit_trait: Only submit form elements that have changed...We only submit form elements that have changed, and use that to update the relevant tables. See: https://stackoverflow.com/a/5221915 BonfaceKilz
2021-05-28Added comment clarifying the situation with views.py importszsloan
2021-05-28Re-added collect import in views.py since it was removed before (I'm guessing...zsloan
2021-05-27Merge pull request #579 from zsloan/feature/rqtl_with_gn3...Use GN3 API for R/qtlzsloan
2021-05-27Fix the way Mock is initializedzsloan
2021-05-27Change test_rqtl_mapping.py to account for full results being returned from t...zsloan
2021-05-27Fixed way MockGroup was initializedzsloan
2021-05-27Forgot to import dataclasszsloan
2021-05-27Fixed syntax mistake when creating dataclass in test_rqtl_mapping.pyzsloan
2021-05-27Removed parts of test_rqtl_mapping.py referring to process_perm_results and p...zsloan
2021-05-27Updated test_run_mapping.py to account for attribute keys being checked as lo...zsloan
2021-05-27Improved test_rqtl_mapping.py with Bonface's recommendation of uses dataclasseszsloan
2021-05-27Make all attribute names lowercase to deal with situations where sometimes th...zsloan
2021-05-27Add code writing perm_strata to phenotype input file in rqtl_mapping.py + fix...zsloan
2021-05-26doc: docker-container: Rename python3-genenetwork2 to genenetwork2...See: https://is.gd/gHJvhe BonfaceKilz
2021-05-26workflows: main: Use "bonfacekilz/genenetwork2:latest" docker imageBonfaceKilz
2021-05-26wqflask: views: Update comment when data is edited...For now the exact column that's edited isn't tracked. BonfaceKilz
2021-05-26wqflask: views: Import "fetchone" & "update" from "gn3.db"BonfaceKilz
2021-05-26Use @admin_login_required to only enable Rob to do edits to traits...* wqflask/wqflask/decorators.py (admin_login_required): New decorator. * wqflask/wqflask/views.py (edit_trait): Use admin_login_required decorator. BonfaceKilz
2021-05-26wqflask: views: Add method that updates the trait...* wqflask/wqflask/views.py (update_trait): New function. BonfaceKilz
2021-05-26templates: edit_trait: Submit publish_xref dataBonfaceKilz
2021-05-26wqflask: views: Remove unused importsBonfaceKilz
2021-05-26wqflask: views: Make imports top-levelBonfaceKilz
2021-05-26templates: edit_trait: Make form functional(add ability to submit)BonfaceKilz
2021-05-26wqflask: views: Add edit_trait page...Should add some some authentication logic to this later since it's not supposed to be accessible to everyone. BonfaceKilz
2021-05-26templates: edit_trait: Update edit btn to point to editing endpointBonfaceKilz
2021-05-26wqflask: views: Add extra endpoint to display individual trait edit...* wqflask/wqflask/views.py (show_edit_trait_page): New function/ end-point. BonfaceKilz
2021-05-26templates: show_trait_details: Add an "[edit]" buttonBonfaceKilz
2021-05-26tests: test_gen_menu: Remove get_speciesBonfaceKilz
2021-05-26api: gen_menu: Replace get_species with get_all_species from gn3...* wqflask/wqflask/api/gen_menu.py (gen_dropdown_json): Use new `get_all_species` function. (get_species): Remove it. BonfaceKilz
2021-05-26db: webqtlDatabaseFunction: Remove commentBonfaceKilz
2021-05-26db: webqtlDatabaseFunction: Remove logger infoBonfaceKilz
2021-05-26wqflask: database: Replace one-line function with it's body...* wqflask/wqflask/database.py (init_db): Remove it. BonfaceKilz
2021-05-26templates: edit_trait: Add form for editing a dataset (WIP)BonfaceKilz
2021-05-25Fixed/shortened get_categorical_variables function and correctly pass them to...zsloan
2021-05-25Removed code that processes output files, since this functionality is moved t...zsloan