index
:
genenetwork2
acenteno
authentication_test
blatseq_fix
chores/code-refactoring
chores/lmdb-integration
chores/replace-cdns
chores/script-textfile-generator
correlations-return-fewer-results
debug-too-many-connections-error
decouple_tools_and_wqflask_app
development
epysode
feature/search-history
feature/textfile-generator
gn-master
guix-shell
hook-up-auth-to-traits-page
itp_covariate_testing
jupyter_notebooks_ui
lmdb-code/refactoring
master
notebooks_api
oauth2-migrate-user-details-and-data
partial-correlations
partial_corr_ui_rework
pcorrs_targets
penguin2
phewas
production
proxy-integration
refactor-configurations
refactor-data_set_py-20220920
revert-366-360_update_htmlgen
rework-genotype-linking
run-corrs-in-external-process
stable
testing
GeneNetwork (2nd generation)
about
summary
refs
log
tree
commit
diff
log msg
author
committer
range
Age
Commit message (
Expand
)
Author
2021-06-07
templates: edit_trait: Use correct name for text-area field
BonfaceKilz
2021-06-07
templates: edit_trait: Add hidden inputs that contain old values
BonfaceKilz
2021-06-07
Update class docstring
...
Author: jgart <jgart@dismail.de> Date: Fri Jun 4 22:12:35 2021 +0000
jgart
2021-06-04
Set widths for column in gene global search + set min-width for table as a whole
zsloan
2021-06-03
Change LRS scores of 0.000 to N/A since they're listed wrong in the DB + fix ...
zsloan
2021-06-03
Changed gsearch_pheno template to use Scroller and also set column widths
zsloan
2021-06-03
Implemented Scroller with gene global search; for the time being this disable...
zsloan
2021-06-03
Made the code for setting some trait fields (like additive, mean, max_lrs_tex...
zsloan
2021-06-01
Fixed issue that caused attribute alignments to be off by one position
zsloan
2021-06-01
Made Genotype drop-down a little wider, since the genotype file names can be ...
zsloan
2021-06-01
Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing
zsloan
2021-06-01
Make the container div for the trait table have a minimum width scaling off o...
zsloan
2021-06-01
templates: edit_trait: Use correct textarea "name" for post_pub_desc
BonfaceKilz
2021-06-01
templates: edit_trait: Add "changed" class to hidden input values
...
When a form element changes, it's marked as changed. Only input elements with "changed" get submitted. Since we need to submit the "hidden" input fields, we add "changed" to them anyways.
BonfaceKilz
2021-06-01
templates: edit_trait: Only submit form elements that have changed
...
We only submit form elements that have changed, and use that to update the relevant tables. See: https://stackoverflow.com/a/5221915
BonfaceKilz
2021-05-28
Added comment clarifying the situation with views.py imports
zsloan
2021-05-28
Re-added collect import in views.py since it was removed before (I'm guessing...
zsloan
2021-05-27
Merge pull request #579 from zsloan/feature/rqtl_with_gn3
...
Use GN3 API for R/qtl
zsloan
2021-05-27
Fix the way Mock is initialized
zsloan
2021-05-27
Change test_rqtl_mapping.py to account for full results being returned from t...
zsloan
2021-05-27
Fixed way MockGroup was initialized
zsloan
2021-05-27
Forgot to import dataclass
zsloan
2021-05-27
Fixed syntax mistake when creating dataclass in test_rqtl_mapping.py
zsloan
2021-05-27
Removed parts of test_rqtl_mapping.py referring to process_perm_results and p...
zsloan
2021-05-27
Updated test_run_mapping.py to account for attribute keys being checked as lo...
zsloan
2021-05-27
Improved test_rqtl_mapping.py with Bonface's recommendation of uses dataclasses
zsloan
2021-05-27
Make all attribute names lowercase to deal with situations where sometimes th...
zsloan
2021-05-27
Add code writing perm_strata to phenotype input file in rqtl_mapping.py + fix...
zsloan
2021-05-26
doc: docker-container: Rename python3-genenetwork2 to genenetwork2
...
See: https://is.gd/gHJvhe
BonfaceKilz
2021-05-26
workflows: main: Use "bonfacekilz/genenetwork2:latest" docker image
BonfaceKilz
2021-05-26
wqflask: views: Update comment when data is edited
...
For now the exact column that's edited isn't tracked.
BonfaceKilz
2021-05-26
wqflask: views: Import "fetchone" & "update" from "gn3.db"
BonfaceKilz
2021-05-26
Use @admin_login_required to only enable Rob to do edits to traits
...
* wqflask/wqflask/decorators.py (admin_login_required): New decorator. * wqflask/wqflask/views.py (edit_trait): Use admin_login_required decorator.
BonfaceKilz
2021-05-26
wqflask: views: Add method that updates the trait
...
* wqflask/wqflask/views.py (update_trait): New function.
BonfaceKilz
2021-05-26
templates: edit_trait: Submit publish_xref data
BonfaceKilz
2021-05-26
wqflask: views: Remove unused imports
BonfaceKilz
2021-05-26
wqflask: views: Make imports top-level
BonfaceKilz
2021-05-26
templates: edit_trait: Make form functional(add ability to submit)
BonfaceKilz
2021-05-26
wqflask: views: Add edit_trait page
...
Should add some some authentication logic to this later since it's not supposed to be accessible to everyone.
BonfaceKilz
2021-05-26
templates: edit_trait: Update edit btn to point to editing endpoint
BonfaceKilz
2021-05-26
wqflask: views: Add extra endpoint to display individual trait edit
...
* wqflask/wqflask/views.py (show_edit_trait_page): New function/ end-point.
BonfaceKilz
2021-05-26
templates: show_trait_details: Add an "[edit]" button
BonfaceKilz
2021-05-26
tests: test_gen_menu: Remove get_species
BonfaceKilz
2021-05-26
api: gen_menu: Replace get_species with get_all_species from gn3
...
* wqflask/wqflask/api/gen_menu.py (gen_dropdown_json): Use new `get_all_species` function. (get_species): Remove it.
BonfaceKilz
2021-05-26
db: webqtlDatabaseFunction: Remove comment
BonfaceKilz
2021-05-26
db: webqtlDatabaseFunction: Remove logger info
BonfaceKilz
2021-05-26
wqflask: database: Replace one-line function with it's body
...
* wqflask/wqflask/database.py (init_db): Remove it.
BonfaceKilz
2021-05-26
templates: edit_trait: Add form for editing a dataset (WIP)
BonfaceKilz
2021-05-25
Fixed/shortened get_categorical_variables function and correctly pass them to...
zsloan
2021-05-25
Removed code that processes output files, since this functionality is moved t...
zsloan
[prev]
[next]