diff options
Diffstat (limited to 'wqflask')
| -rw-r--r-- | wqflask/base/data_set.py | 8 | ||||
| -rw-r--r-- | wqflask/wqflask/show_trait/show_trait.py | 5 |
2 files changed, 9 insertions, 4 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py index d9b7f668..f58367ca 100644 --- a/wqflask/base/data_set.py +++ b/wqflask/base/data_set.py @@ -119,8 +119,12 @@ Publish or ProbeSet. E.g. def __call__(self, name): return self.datasets[name] +def rebuild_dataset_ob(): + Dataset_Getter = Dataset_Types() + return Dataset_Getter + # Do the intensive work at startup one time only -Dataset_Getter = Dataset_Types() +Dataset_Getter = rebuild_dataset_ob() def create_datasets_list(): if USE_REDIS: @@ -922,7 +926,7 @@ class MrnaAssayDataSet(DataSet): 'blatseq', 'targetseq', 'chipid', 'comments', 'strand_probe', 'strand_gene', - 'proteinid', + 'proteinid', 'uniprotid', 'probe_set_target_region', 'probe_set_specificity', 'probe_set_blat_score', diff --git a/wqflask/wqflask/show_trait/show_trait.py b/wqflask/wqflask/show_trait/show_trait.py index e7423293..64597711 100644 --- a/wqflask/wqflask/show_trait/show_trait.py +++ b/wqflask/wqflask/show_trait/show_trait.py @@ -45,6 +45,7 @@ class ShowTrait(object): if 'trait_id' in kw and kw['dataset'] != "Temp": self.temp_trait = False self.trait_id = kw['trait_id'] + data_set.rebuild_dataset_ob() helper_functions.get_species_dataset_trait(self, kw) elif 'group' in kw: self.temp_trait = True @@ -268,8 +269,8 @@ class ShowTrait(object): self.genbank_link = webqtlConfig.GENBANK_ID % genbank_id self.uniprot_link = None - if check_if_attr_exists(self.this_trait, 'proteinid'): - self.uniprot_link = webqtlConfig.UNIPROT_URL % self.this_trait.proteinid + if check_if_attr_exists(self.this_trait, 'uniprotid'): + self.uniprot_link = webqtlConfig.UNIPROT_URL % self.this_trait.uniprotid self.genotation_link = self.gtex_link = self.genebridge_link = self.ucsc_blat_link = self.biogps_link = self.protein_atlas_link = None self.string_link = self.panther_link = self.aba_link = self.ebi_gwas_link = self.wiki_pi_link = self.genemania_link = self.ensembl_link = None |