diff options
Diffstat (limited to 'wqflask')
| -rwxr-xr-x | wqflask/wqflask/marker_regression/marker_regression.py | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/wqflask/wqflask/marker_regression/marker_regression.py b/wqflask/wqflask/marker_regression/marker_regression.py index ae3e062f..c80bba8e 100755 --- a/wqflask/wqflask/marker_regression/marker_regression.py +++ b/wqflask/wqflask/marker_regression/marker_regression.py @@ -128,7 +128,7 @@ class MarkerRegression(object): #Need to convert the QTL objects that qtl reaper returns into a json serializable dictionary self.qtl_results = [] for qtl in self.filtered_markers: - print("lod score is:", qtl['lod_score']) + # print("lod score is:", qtl['lod_score']) if qtl['chr'] == highest_chr and highest_chr != "X" and highest_chr != "X/Y": print("changing to X") self.json_data['chr'].append("X") @@ -145,7 +145,7 @@ class MarkerRegression(object): self.json_data['chrnames'].append([self.species.chromosomes.chromosomes[key].name, self.species.chromosomes.chromosomes[key].mb_length]) chromosome_mb_lengths[key] = self.species.chromosomes.chromosomes[key].mb_length - print("json_data:", self.json_data) + # print("json_data:", self.json_data) self.js_data = dict( @@ -745,7 +745,7 @@ class MarkerRegression(object): json_results = Redis.blpop("pylmm:results:" + temp_uuid, 45*60) results = json.loads(json_results[1]) p_values = [float(result) for result in results['p_values']] - print("p_values:", p_values) + print("p_values:", p_values[:10]) #p_values = self.trim_results(p_values) t_stats = results['t_stats'] |