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-rw-r--r--wqflask/wqflask/static/new/javascript/show_trait.js8
-rw-r--r--wqflask/wqflask/templates/mapping_results.html13
2 files changed, 13 insertions, 8 deletions
diff --git a/wqflask/wqflask/static/new/javascript/show_trait.js b/wqflask/wqflask/static/new/javascript/show_trait.js
index 003e0a90..28d13345 100644
--- a/wqflask/wqflask/static/new/javascript/show_trait.js
+++ b/wqflask/wqflask/static/new/javascript/show_trait.js
@@ -73,10 +73,12 @@ Stat_Table_Rows.push(
}, {
vn: "skewness",
pretty: "Skewness",
+ url: "https://en.wikipedia.org/wiki/Skewness",
digits: 3
}, {
vn: "kurtosis",
- pretty: "Kurtosis",
+ pretty: "Excess Kurtosis",
+ url: "https://en.wikipedia.org/wiki/Kurtosis",
digits: 3
}
);
@@ -389,7 +391,7 @@ make_table = function() {
}
row_line = "<tr>";
if (row.url != null) {
- row_line += "<td id=\"" + row.vn + "\" align=\"right\"><a href=\"" + row.url + "\" style=\"color: #000000;\">" + row.pretty + "</a></td>";
+ row_line += "<td id=\"" + row.vn + "\" align=\"right\"><a href=\"" + row.url + "\" style=\"color: #0000EE;\">" + row.pretty + "</a></td>";
} else {
row_line += "<td id=\"" + row.vn + "\" align=\"right\">" + row.pretty + "</td>";
}
@@ -839,7 +841,7 @@ get_sample_table_data = function(table_name) {
for (key in _ref) {
if (!__hasProp.call(_ref, key)) continue;
attribute_info = _ref[key];
- row_data[attribute_info.name] = $.trim($(element).find('.column_name-' + attribute_info.name.replace(" ", "_")).text());
+ row_data[attribute_info.name] = $.trim($(element).find('.column_name-' + attribute_info.name.replace(" ", "_").replace("/", "\\/")).text());
}
return samples.push(row_data);
};
diff --git a/wqflask/wqflask/templates/mapping_results.html b/wqflask/wqflask/templates/mapping_results.html
index c046f7fb..ba0ebef9 100644
--- a/wqflask/wqflask/templates/mapping_results.html
+++ b/wqflask/wqflask/templates/mapping_results.html
@@ -207,7 +207,7 @@
<div id="perm_histogram" class="barchart"></div>
<!--<img src="/generated/{{ perm_filename }}.gif">-->
<br><br>
- Total of {{ nperm }} permutations&nbsp;&nbsp;<a href="javascript:export_perm_data();" target="_blank" >Download Permutation Results</a>
+ Total of {{ nperm }} permutations&nbsp;&nbsp;<a href="javascript:;" id="download_perm" target="_blank" >Download Permutation Results</a>
<br>
{% endif %}
</div>
@@ -229,7 +229,7 @@
<tr>
<th></th>
<th>Row</th>
- <th>Locus</th>
+ <th>Marker</th>
<th>{{ LRS_LOD }}</th>
<th>Chr</th>
{% if plotScale != "physic" %}
@@ -426,6 +426,7 @@
$('input[name=selected_chr]').val(this_chr)
$('input[name=chr_mb_list]').val(chr_mb_list)
+ $('#marker_regression_form').attr('action', '/run_mapping');
return $('#marker_regression_form').submit();
};
@@ -435,24 +436,26 @@
$('input[name=endMb]').val(end_mb)
//$('input[name=mb_range]').val(start_mb + "," + end_mb)
+ $('#marker_regression_form').attr('action', '/run_mapping');
return $('#marker_regression_form').submit();
};
remap = function() {
$('input[name=selected_chr]').val($('select[name=chromosomes]').val());
+ $('#marker_regression_form').attr('action', '/run_mapping');
return $('#marker_regression_form').submit();
};
{% if mapping_method != "gemma" and mapping_method != "plink" %}
- export_perm_data = function() {
- var num_perm, perm_data;
+ $('#download_perm').click(function(){
+ var num_perm, perm_data;
num_perm = js_data.num_perm
perm_data = js_data.perm_results
json_perm_data = JSON.stringify(perm_data);
$('input[name=perm_results]').val(json_perm_data);
$('#marker_regression_form').attr('action', '/export_perm_data');
return $('#marker_regression_form').submit();
- }
+ });
modebar_options = {
modeBarButtonsToAdd:[{