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-rw-r--r--wqflask/wqflask/templates/genotype.html86
-rw-r--r--wqflask/wqflask/views.py13
2 files changed, 99 insertions, 0 deletions
diff --git a/wqflask/wqflask/templates/genotype.html b/wqflask/wqflask/templates/genotype.html
new file mode 100644
index 00000000..788586a3
--- /dev/null
+++ b/wqflask/wqflask/templates/genotype.html
@@ -0,0 +1,86 @@
+{% extends "base.html" %}
+
+{% block css %}
+<style type="text/css">
+ .page-header {
+ text-underline-offset: 0.5rem;
+ padding: 1em;
+ }
+</style>
+{% endblock %}
+
+{% block title %}Genotype: {{ name }}{% endblock %}
+
+{% block content %}
+
+<h1 class="page-header">
+ {% if metadata.name %}
+ <u>Genotype: {{ metadata.name }}</u>
+ {% else %}
+ {{ name }}
+ {% endif %}
+</h1>
+
+<div class="container">
+ <table class="table">
+ {% if metadata.datasetName %}
+ <tr>
+ <td><b>Dataset: </b></td>
+ <td>
+ <a href="{{ metadata.genotypeOfDataset }}" target="_blank">{{ metadata.datasetName }}</a>
+ </td>
+ </tr>
+ {% endif %}
+
+ {% if metadata.inbredSetName %}
+ <tr>
+ <td><b>Group</b></td>
+ <td>{{ metadata.inbredSetName }}</td>
+ </tr>
+ {% endif %}
+
+ {% if metadata.speciesName %}
+ <tr>
+ <td><b>Species</b></td>
+ <td>{{ metadata.speciesName }}</td>
+ </tr>
+ {% endif %}
+
+ {% if metadata.cM %}
+ <tr>
+ <td><b>cM</b></td>
+ <td>{{ metadata.cM }}</td>
+ </tr>
+ {% endif %}
+
+ {% if metadata.mb %}
+ <tr>
+ <td><b>mb</b></td>
+ <td>{{ metadata.mb }}</td>
+ </tr>
+ {% endif %}
+
+ {% if metadata.sequence %}
+ <tr>
+ <td><b>Sequence</b></td>
+ <td>metadata.sequence</td>
+ </tr>
+ {% endif %}
+
+ {% if metadata.source %}
+ <tr>
+ <td><b>Source</b></td>
+ <td>{{ metadata.source}}</td>
+ </tr>
+ {% endif %}
+
+ {% if metadata.markerName %}
+ <tr>
+ <td><b>Marker Name</b></td>
+ <td>{{ metadata.markerName}}</td>
+ </tr>
+ {% endif %}
+ </table>
+</div>
+
+{% endblock %}
diff --git a/wqflask/wqflask/views.py b/wqflask/wqflask/views.py
index 8ac116be..e7a32d34 100644
--- a/wqflask/wqflask/views.py
+++ b/wqflask/wqflask/views.py
@@ -1144,3 +1144,16 @@ def get_phenotype(name):
"phenotype.html",
metadata=metadata,
)
+
+
+@app.route("/genotype/<name>", methods=('GET',))
+def get_genotype(name):
+ metadata = requests.get(
+ urljoin(
+ GN3_LOCAL_URL,
+ f"/api/metadata/genotype/{name}")
+ ).json()
+ return render_template(
+ "genotype.html",
+ metadata=metadata,
+ )