diff options
Diffstat (limited to 'wqflask')
| -rw-r--r-- | wqflask/maintenance/gen_select_dataset.py | 2 | ||||
| -rw-r--r-- | wqflask/wqflask/static/new/javascript/dataset_menu_structure.json | 98 |
2 files changed, 60 insertions, 40 deletions
diff --git a/wqflask/maintenance/gen_select_dataset.py b/wqflask/maintenance/gen_select_dataset.py index 1123f997..f62d0cc1 100644 --- a/wqflask/maintenance/gen_select_dataset.py +++ b/wqflask/maintenance/gen_select_dataset.py @@ -101,7 +101,7 @@ def get_groups(species): or GenoFreeze.InbredSetId = InbredSet.Id or ProbeFreeze.InbredSetId = InbredSet.Id) group by InbredSet.Name - order by InbredSet.Name""" % species_name) + order by InbredSet.FullName""" % species_name) results = Cursor.fetchall() groups[species_name] = list(results) return groups diff --git a/wqflask/wqflask/static/new/javascript/dataset_menu_structure.json b/wqflask/wqflask/static/new/javascript/dataset_menu_structure.json index 8bdd91db..eabddbc4 100644 --- a/wqflask/wqflask/static/new/javascript/dataset_menu_structure.json +++ b/wqflask/wqflask/static/new/javascript/dataset_menu_structure.json @@ -2218,6 +2218,26 @@ "819", "UCLA_BXD_Aor_Jan16", "UCLA BXD Aorta Affy M430 2.0 (Jan16) RMA" + ], + [ + "485", + "EPFL-LISPBXDHeCD0114", + "EPFL/LISP BXD CD Heart Affy Mouse Gene 2.0 ST Gene Level (Jan14) RMA" + ], + [ + "486", + "EPFL-LISPBXDHeHFD0114", + "EPFL/LISP BXD HFD Heart Affy Mouse Gene 2.0 ST Gene Level (Jan14) RMA" + ], + [ + "487", + "EPFL-LISPBXDHeCDEx0114", + "EPFL/LISP BXD CD Heart Affy Mouse Gene 2.0 ST Exon Level (Jan14) RMA" + ], + [ + "488", + "EPFL-LISPBXDHeHFDEx0114", + "EPFL/LISP BXD HFD Heart Affy Mouse Gene 2.0 ST Exon Level (Jan14) RMA" ] ], "Hematopoietic Cells mRNA": [ @@ -3730,6 +3750,10 @@ ], "human": [ [ + "HB", + "Brain, Aging: AD, HD, Normal Gene Expression (Harvard/Merck)" + ], + [ "AD-cases-controls", "Brain, Aging: AD, Normal Gene Expression (Liang)" ], @@ -3742,6 +3766,14 @@ "Brain, Aging: Normal Gene Expression (UCI/Cotman)" ], [ + "HCP", + "Brain, Cognition, Human Connectome Project" + ], + [ + "HSB", + "Brain, Development: Normal Gene Expression (Yale/Sestan)" + ], + [ "Brain-Normal-NIH-Gibbs", "Brain: Normal Gene Expression (NIH/Gibbs)" ], @@ -3750,10 +3782,6 @@ "Child Development: CANDLE Cohort with Genotypes (TUCI/UTHSC)" ], [ - "CEPH-2004", - "Lymphoblastoid Cells: Gene Expression (CEPH, Williams)" - ], - [ "GTEx", "GTEx v3 All Tissues, RNA-Seq with Genotypes" ], @@ -3762,14 +3790,6 @@ "GTEx v5 All Tissues, RNA-Seq with Genotypes" ], [ - "HB", - "Brain, Aging: AD, HD, Normal Gene Expression (Harvard/Merck)" - ], - [ - "HCP", - "Brain, Cognition, Human Connectome Project" - ], - [ "HLC", "Liver: Normal Gene Expression with Genotypes (Merck)" ], @@ -3778,8 +3798,8 @@ "Lung: Normal Gene Expression (Merck)" ], [ - "HSB", - "Brain, Development: Normal Gene Expression (Yale/Sestan)" + "CEPH-2004", + "Lymphoblastoid Cells: Gene Expression (CEPH, Williams)" ], [ "Islets-Gerling", @@ -3804,8 +3824,8 @@ "B6BTBRF2" ], [ - "B6D2", - "Glaucoma and Aged Retina, UTHSC" + "Linsenbardt-Boehm", + "B6D2 EtOH Selected Advanced Intercross" ], [ "B6D2F2", @@ -3816,10 +3836,6 @@ "B6D2F2 PSU" ], [ - "B6D2RI", - "BXD Aged" - ], - [ "BDF2-1999", "BDF2 UCLA" ], @@ -3828,18 +3844,22 @@ "BDF2-2005" ], [ - "BHF2", - "BHF2 (Apoe Null) UCLA" - ], - [ "BHHBF2", "BH/HB F2 UCLA" ], [ + "BHF2", + "BHF2 (Apoe Null) UCLA" + ], + [ "BXD", "BXD" ], [ + "B6D2RI", + "BXD Aged" + ], + [ "BXD-Bone", "BXD Bone" ], @@ -3852,8 +3872,8 @@ "BXH" ], [ - "C57BL-6JxC57BL-6NJF2", - "Reduced Complexity Cross (B6JxB6N F2)" + "CTB6F2", + "CastB6/B6Cast F2 UCLA" ], [ "CFW", @@ -3872,10 +3892,6 @@ "Chronic Mild Stress" ], [ - "CTB6F2", - "CastB6/B6Cast F2 UCLA" - ], - [ "CXB", "CXB" ], @@ -3884,6 +3900,10 @@ "Ethanol-Medicated Stress Reduction" ], [ + "B6D2", + "Glaucoma and Aged Retina, UTHSC" + ], + [ "HS", "Heterogeneous Stock" ], @@ -3892,10 +3912,6 @@ "Heterogeneous Stock Collaborative Cross" ], [ - "Linsenbardt-Boehm", - "B6D2 EtOH Selected Advanced Intercross" - ], - [ "LXS", "LXS" ], @@ -3908,6 +3924,10 @@ "NZB/FVB N2 NCI" ], [ + "C57BL-6JxC57BL-6NJF2", + "Reduced Complexity Cross (B6JxB6N F2)" + ], + [ "Scripps-2013", "Scripps C57BL/6J" ], @@ -3924,6 +3944,10 @@ ], "rat": [ [ + "HXBBXH", + "HXB/BXH" + ], + [ "HSNIH-Palmer", "NIH Heterogeneous Stock (Palmer)" ], @@ -3932,10 +3956,6 @@ "NIH Heterogeneous Stock (RGSMC 2013)" ], [ - "HXBBXH", - "HXB/BXH" - ], - [ "SRxSHRSPF2", "UIOWA SRxSHRSP F2" ] @@ -3968,7 +3988,7 @@ ], [ "rat", - "Rat (rn3)" + "Rat (rn6)" ], [ "drosophila", |