diff options
Diffstat (limited to 'wqflask/wqflask/my_pylmm/pyLMM/runlmm.py')
| -rw-r--r-- | wqflask/wqflask/my_pylmm/pyLMM/runlmm.py | 2 |
1 files changed, 2 insertions, 0 deletions
diff --git a/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py b/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py index 88e2a033..fc7a4b9d 100644 --- a/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py +++ b/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py @@ -106,6 +106,8 @@ if options.geno: if cmd == 'redis_new': # The main difference between redis_new and redis is that missing # phenotypes are handled by the first + if options.remove_missing_phenotypes: + raise Exception('Can not use --remove-missing-phenotypes with LMM2') Y = y G = g print "Original G",G.shape, "\n", G |