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-rw-r--r--wqflask/wqflask/my_pylmm/pyLMM/runlmm.py2
1 files changed, 1 insertions, 1 deletions
diff --git a/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py b/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py
index 6a38da56..88e2a033 100644
--- a/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py
+++ b/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py
@@ -184,7 +184,7 @@ elif cmd == 'kinship':
gnt = None
if options.test_kinship:
- K = kinship_full(np.copy(G))
+ K = kinship_full(np.copy(G),uses)
print "Genotype",G.shape, "\n", G
print "first Kinship method",K.shape,"\n",K
k1 = round(K[0][0],4)