diff options
Diffstat (limited to 'wqflask/wqflask/do_search.py')
| -rwxr-xr-x | wqflask/wqflask/do_search.py | 14 |
1 files changed, 11 insertions, 3 deletions
diff --git a/wqflask/wqflask/do_search.py b/wqflask/wqflask/do_search.py index 9e88215a..90d88a5a 100755 --- a/wqflask/wqflask/do_search.py +++ b/wqflask/wqflask/do_search.py @@ -595,6 +595,7 @@ class MrnaLrsSearch(LrsSearch, MrnaAssaySearch): self.from_clause = self.get_from_clause() self.where_clause = self.get_where_clause() + self.query = self.compile_final_query(from_clause = self.from_clause, where_clause = self.where_clause) return self.execute(self.query) @@ -607,6 +608,7 @@ class PhenotypeLrsSearch(LrsSearch, PhenotypeSearch): self.from_clause = self.get_from_clause() self.where_clause = self.get_where_clause() + self.query = self.compile_final_query(from_clause = self.from_clause, where_clause = self.where_clause) return self.execute(self.query) @@ -614,7 +616,7 @@ class PhenotypeLrsSearch(LrsSearch, PhenotypeSearch): class CisTransLrsSearch(DoSearch): def get_from_clause(self): - return ", Geno " + return ", Geno" def get_where_clause(self, cis_trans): self.search_term = [float(value) for value in self.search_term] @@ -699,9 +701,12 @@ class CisLrsSearch(CisTransLrsSearch, MrnaAssaySearch): DoSearch.search_types['ProbeSet_CISLRS'] = 'CisLrsSearch' + def get_where_clause(self): + return CisTransLrsSearch.get_where_clause(self, "cis") + def run(self): self.from_clause = self.get_from_clause() - self.where_clause = self.get_where_clause("cis") + self.where_clause = self.get_where_clause() self.query = self.compile_final_query(self.from_clause, self.where_clause) @@ -725,9 +730,12 @@ class TransLrsSearch(CisTransLrsSearch, MrnaAssaySearch): DoSearch.search_types['ProbeSet_TRANSLRS'] = 'TransLrsSearch' + def get_where_clause(self): + return CisTransLrsSearch.get_where_clause(self, "trans") + def run(self): self.from_clause = self.get_from_clause() - self.where_clause = self.get_where_clause("trans") + self.where_clause = self.get_where_clause() self.query = self.compile_final_query(self.from_clause, self.where_clause) |