diff options
Diffstat (limited to 'wqflask/utility')
-rw-r--r-- | wqflask/utility/elasticsearch_tools.py | 35 | ||||
-rw-r--r-- | wqflask/utility/tools.py | 23 |
2 files changed, 58 insertions, 0 deletions
diff --git a/wqflask/utility/elasticsearch_tools.py b/wqflask/utility/elasticsearch_tools.py new file mode 100644 index 00000000..8b8ad9cc --- /dev/null +++ b/wqflask/utility/elasticsearch_tools.py @@ -0,0 +1,35 @@ +es = None +try: + from elasticsearch import Elasticsearch, TransportError + from utility.tools import ELASTICSEARCH_HOST, ELASTICSEARCH_PORT + + es = Elasticsearch([{ + "host": ELASTICSEARCH_HOST + , "port": ELASTICSEARCH_PORT + }]) if (ELASTICSEARCH_HOST and ELASTICSEARCH_PORT) else None +except: + es = None + +def get_user_by_unique_column(column_name, column_value): + user_details = None + try: + response = es.search( + index = "users" + , doc_type = "local" + , body = { + "query": { "match": { column_name: column_value } } + }) + if len(response["hits"]["hits"]) > 0: + user_details = response["hits"]["hits"][0]["_source"] + except TransportError as te: + pass + return user_details + +def save_user(user, user_id, index="users", doc_type="local"): + from time import sleep + es = Elasticsearch([{ + "host": ELASTICSEARCH_HOST + , "port": ELASTICSEARCH_PORT + }]) + es.create(index, doc_type, body=user, id=user_id) + sleep(1) # Delay 1 second to allow indexing diff --git a/wqflask/utility/tools.py b/wqflask/utility/tools.py index 57f97a81..feeeccfc 100644 --- a/wqflask/utility/tools.py +++ b/wqflask/utility/tools.py @@ -251,6 +251,29 @@ assert_dir(JS_GUIX_PATH) JS_GN_PATH = get_setting('JS_GN_PATH') # assert_dir(JS_GN_PATH) +def get_setting_safe(setting): + try: + return get_setting(setting) + except: + print("Could not find the setting '", setting, "'. Continuing with value unset") + return None + +GITHUB_CLIENT_ID = get_setting_safe('GITHUB_CLIENT_ID') +GITHUB_CLIENT_SECRET = get_setting_safe('GITHUB_CLIENT_SECRET') +GITHUB_AUTH_URL = None +if GITHUB_CLIENT_ID and GITHUB_CLIENT_SECRET: + GITHUB_AUTH_URL = "https://github.com/login/oauth/authorize?client_id="+GITHUB_CLIENT_ID+"&client_secret="+GITHUB_CLIENT_SECRET +GITHUB_API_URL = get_setting_safe('GITHUB_API_URL') +ORCID_CLIENT_ID = get_setting_safe('ORCID_CLIENT_ID') +ORCID_CLIENT_SECRET = get_setting_safe('ORCID_CLIENT_SECRET') +ORCID_AUTH_URL = None +if ORCID_CLIENT_ID and ORCID_CLIENT_SECRET: + ORCID_AUTH_URL = "https://sandbox.orcid.org/oauth/authorize?response_type=code&scope=/authenticate&show_login=true&client_id="+ORCID_CLIENT_ID+"&client_secret="+ORCID_CLIENT_SECRET +ORCID_TOKEN_URL = get_setting_safe('ORCID_TOKEN_URL') + +ELASTICSEARCH_HOST = get_setting_safe('ELASTICSEARCH_HOST') +ELASTICSEARCH_PORT = get_setting_safe('ELASTICSEARCH_PORT') + PYLMM_COMMAND = app_set("PYLMM_COMMAND",pylmm_command()) GEMMA_COMMAND = app_set("GEMMA_COMMAND",gemma_command()) PLINK_COMMAND = app_set("PLINK_COMMAND",plink_command()) |