diff options
Diffstat (limited to 'wqflask/utility/helper_functions.py')
-rw-r--r-- | wqflask/utility/helper_functions.py | 20 |
1 files changed, 20 insertions, 0 deletions
diff --git a/wqflask/utility/helper_functions.py b/wqflask/utility/helper_functions.py index 377f6b26..cf16879f 100644 --- a/wqflask/utility/helper_functions.py +++ b/wqflask/utility/helper_functions.py @@ -5,6 +5,9 @@ from base import data_set from base.species import TheSpecies from wqflask import user_manager + +from flask import Flask, g + import logging logger = logging.getLogger(__name__ ) @@ -41,3 +44,20 @@ def get_trait_db_obs(self, trait_db_list): name=trait_name, cellid=None) self.trait_list.append((trait_ob, dataset_ob)) + +def get_species_groups(): + + species_query = "SELECT SpeciesId, MenuName FROM Species" + species_ids_and_names = g.db.execute(species_query).fetchall() + + species_and_groups = [] + for species_id, species_name in species_ids_and_names: + this_species_groups = {} + this_species_groups['species'] = species_name + groups_query = "SELECT InbredSetName FROM InbredSet WHERE SpeciesId = %s" % (species_id) + groups = [group[0] for group in g.db.execute(groups_query).fetchall()] + + this_species_groups['groups'] = groups + species_and_groups.append(this_species_groups) + + return species_and_groups |