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-rw-r--r--wqflask/tests/wqflask/marker_regression/test_display_mapping_results.py144
1 files changed, 143 insertions, 1 deletions
diff --git a/wqflask/tests/wqflask/marker_regression/test_display_mapping_results.py b/wqflask/tests/wqflask/marker_regression/test_display_mapping_results.py
index 67da508b..6f791df1 100644
--- a/wqflask/tests/wqflask/marker_regression/test_display_mapping_results.py
+++ b/wqflask/tests/wqflask/marker_regression/test_display_mapping_results.py
@@ -1,9 +1,151 @@
import unittest
-from wqflask.marker_regression.display_mapping_results import DisplayMappingResults
+from htmlgen import HTMLgen2 as HT
+from wqflask.marker_regression.display_mapping_results import (
+ DisplayMappingResults,
+ HtmlGenWrapper
+)
+
class TestDisplayMappingResults(unittest.TestCase):
+ """Basic Methods to test Mapping Results"""
def test_pil_colors(self):
"""Test that colors use PILLOW color format"""
self.assertEqual(DisplayMappingResults.CLICKABLE_WEBQTL_REGION_COLOR,
(245, 211, 211))
+
+
+class TestHtmlGenWrapper(unittest.TestCase):
+ """Test Wrapper around HTMLGen"""
+ def test_create_image(self):
+ """Test HT.Image method"""
+ self.assertEqual(
+ str(HtmlGenWrapper.create_image_tag(src="test.png",
+ alt="random",
+ border="0",
+ width="10",
+ height="13",
+ usemap="#webqtlmap")),
+ ("""<IMG src="test.png" height="13" width="10" """
+ """alt="random" border="0" """
+ """usemap="#webqtlmap">""")
+ )
+
+ def test_create_form(self):
+ """Test HT.Form method"""
+ test_form = HtmlGenWrapper.create_form_tag(
+ cgi="/testing/",
+ enctype='multipart/form-data',
+ name="formName",
+ submit=HT.Input(type='hidden')
+ )
+ test_image = HtmlGenWrapper.create_image_tag(
+ src="test.png",
+ alt="random",
+ border="0",
+ width="10",
+ height="13",
+ usemap="#webqtlmap"
+ )
+ self.assertEqual(
+ str(test_form).replace("\n", ""),
+ ("""<FORM METHOD="POST" ACTION="/testing/" """
+ """ENCTYPE="multipart/form-data" """
+ """NAME="formName"><INPUT TYPE="hidden" """
+ """NAME="Default_Name"></FORM>"""))
+ hddn = {
+ 'FormID': 'showDatabase',
+ 'ProbeSetID': '_',
+ 'database': "TestGeno",
+ 'CellID': '_',
+ 'RISet': "Test",
+ 'incparentsf1': 'ON'
+ }
+ for key in hddn.keys():
+ test_form.append(HT.Input(name=key, value=hddn[key],
+ type='hidden'))
+ test_form.append(test_image)
+ self.assertEqual(str(test_form).replace("\n", ""), (
+ """<FORM METHOD="POST" ACTION="/testing/" """
+ """ENCTYPE="multipart/form-data" NAME="formName">"""
+ """<INPUT TYPE="hidden" NAME="database" VALUE="TestGeno">"""
+ """<INPUT TYPE="hidden" NAME="incparentsf1" VALUE="ON">"""
+ """<INPUT TYPE="hidden" NAME="FormID" VALUE="showDatabase">"""
+ """<INPUT TYPE="hidden" NAME="ProbeSetID" VALUE="_">"""
+ """<INPUT TYPE="hidden" NAME="RISet" VALUE="Test">"""
+ """<INPUT TYPE="hidden" NAME="CellID" VALUE="_">"""
+ """<IMG src="test.png" height="13" width="10" alt="random" """
+ """border="0" usemap="#webqtlmap">"""
+ """<INPUT TYPE="hidden" NAME="Default_Name"></FORM>"""))
+
+ def test_create_paragraph(self):
+ """Test HT.Paragraph method"""
+ test_p_element = HtmlGenWrapper.create_p_tag(id="smallSize")
+ par_text = (
+ "Mapping using genotype data as "
+ "a trait will result in infinity LRS at one locus. "
+ "In order to display the result properly, all LRSs "
+ "higher than 100 are capped at 100."
+ )
+ self.assertEqual(
+ str(test_p_element),
+ """<P id="smallSize"></P>"""
+ )
+ test_p_element.append(HT.BR())
+ test_p_element.append(par_text)
+ self.assertEqual(
+ str(test_p_element),
+ """<P id="smallSize"><BR>{}</P>""".format(par_text)
+ )
+
+ def test_create_br_tag(self):
+ """Test HT.BR() method"""
+ self.assertEqual(str(HtmlGenWrapper.create_br_tag()),
+ "<BR>")
+
+ def test_create_input_tag(self):
+ """Test HT.Input method"""
+ self.assertEqual(
+ str(HtmlGenWrapper.create_input_tag(
+ type="hidden",
+ name="name",
+ value="key",
+ Class="trait trait_")).replace("\n", ""),
+ ("""<INPUT TYPE="hidden" NAME="name" """
+ """class="trait trait_" VALUE="key">"""))
+
+ def test_create_map_tag(self):
+ """Test HT.Map method"""
+ self.assertEqual(str(HtmlGenWrapper.create_map_tag(
+ name="WebqTLImageMap")).replace("\n", ""),
+ """<MAP NAME="WebqTLImageMap"></MAP>""")
+ gifmap = HtmlGenWrapper.create_map_tag(areas=[])
+ gifmap.areas.append(HT.Area(shape="rect",
+ coords='1 2 3', href='#area1'))
+ gifmap.areas.append(HT.Area(shape="rect",
+ coords='1 2 3', href='#area2'))
+ self.assertEqual(
+ str(gifmap).replace("\n", ""),
+ ("""<MAP NAME="">"""
+ """<AREA coords="1 2 3" """
+ """href="#area1" shape="rect">"""
+ """<AREA coords="1 2 3" href="#area2" shape="rect">"""
+ """</MAP>"""))
+
+ def test_create_area_tag(self):
+ """Test HT.Area method"""
+ self.assertEqual(
+ str(HtmlGenWrapper.create_area_tag(
+ shape="rect",
+ coords="1 2",
+ href="http://test.com",
+ title="Some Title")).replace("\n", ""),
+ ("""<AREA coords="1 2" href="http://test.com" """
+ """shape="rect" title="Some Title">"""))
+
+ def test_create_link_tag(self):
+ """Test HT.HREF method"""
+ self.assertEqual(
+ str(HtmlGenWrapper.create_link_tag(
+ "www.test.com", "test", target="_blank")).replace("\n", ""),
+ """<A HREF="www.test.com" TARGET="_blank">test</A>""")