diff options
Diffstat (limited to 'wqflask/tests')
| -rw-r--r-- | wqflask/tests/api/test_gen_menu.py | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/wqflask/tests/api/test_gen_menu.py b/wqflask/tests/api/test_gen_menu.py index ec380b6f..24899765 100644 --- a/wqflask/tests/api/test_gen_menu.py +++ b/wqflask/tests/api/test_gen_menu.py @@ -7,6 +7,7 @@ from wqflask.api.gen_menu import get_groups from wqflask.api.gen_menu import phenotypes_exist from wqflask.api.gen_menu import genotypes_exist from wqflask.api.gen_menu import build_datasets +from wqflask.api.gen_menu import build_types class TestGenMenu(unittest.TestCase): @@ -177,3 +178,29 @@ class TestGenMenu(unittest.TestCase): "Tissue.Name = 'mRNA' AND ProbeFreeze.TissueId = " + "Tissue.Id and ProbeFreeze.InbredSetId = InbredSet.Id " + "ORDER BY ProbeSetFreeze.CreateTime DESC") + + @mock.patch('wqflask.api.gen_menu.build_datasets') + @mock.patch('wqflask.api.gen_menu.g') + def test_build_types(self, db_mock, datasets_mock): + """Test that correct tissue metadata is returned""" + datasets_mock.return_value = [ + ["112", 'HC_M2_0606_P', "Hippocampus Consortium M430v2 (Jun06) PDNN"] + ] + db_mock.db.execute.return_value.fetchall.return_value = ( + ('Mouse Tissue'), ('Human Tissue'), ('Rat Tissue') + ) + self.assertEqual(build_types('mouse', 'random group'), + [['M', 'M', 'Molecular Trait Datasets'], + ['H', 'H', 'Molecular Trait Datasets'], + ['R', 'R', 'Molecular Trait Datasets']]) + db_mock.db.execute.assert_called_once_with( + "SELECT DISTINCT Tissue.Name " + + "FROM ProbeFreeze, ProbeSetFreeze, InbredSet, " + + "Tissue, Species WHERE Species.Name = 'mouse' " + + "AND Species.Id = InbredSet.SpeciesId AND " + + "InbredSet.Name = 'random group' AND " + + "ProbeFreeze.TissueId = Tissue.Id AND " + + "ProbeFreeze.InbredSetId = InbredSet.Id AND " + + "ProbeSetFreeze.ProbeFreezeId = ProbeFreeze.Id " + + "ORDER BY Tissue.Name" + ) |